Variant report

Variant	nsv554185
Chromosome Location	chr11:45389225-45415035
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr11:45412072-45412272	HepG2	liver:	n/a	n/a
2	ARID3A	chr11:45412976-45413124	HepG2	liver:	n/a	n/a
3	ATF1	chr11:45411148-45411332	K562	blood:	n/a	n/a
4	ATF2	chr11:45392692-45393157	H1-hESC	embryonic stem cell:	n/a	n/a
5	BATF	chr11:45400552-45401016	GM12878	blood:	n/a	n/a
6	BHLHE40	chr11:45403769-45403943	K562	blood:	n/a	n/a
7	BHLHE40	chr11:45392879-45393102	GM12878	blood:	n/a	n/a
8	BHLHE40	chr11:45400791-45400862	GM12878	blood:	n/a	n/a
9	BHLHE40	chr11:45392737-45393002	K562	blood:	n/a	n/a
10	BHLHE40	chr11:45412056-45412256	HepG2	liver:	n/a	n/a
11	BRCA1	chr11:45407310-45407344	GM12878	blood:	n/a	n/a
12	CEBPB	chr11:45411970-45412252	HepG2	liver:	n/a	chr11:45412068-45412079
13	CEBPB	chr11:45411954-45412119	HepG2	liver:	n/a	chr11:45412068-45412079
14	CHD1	chr11:45392839-45392937	GM12878	blood:	n/a	n/a
15	CHD2	chr11:45413016-45413020	HepG2	liver:	n/a	n/a
16	CHD2	chr11:45392869-45393122	GM12878	blood:	n/a	n/a
17	CTCF	chr11:45392840-45392990	Caco-2	colon:	n/a	chr11:45392930-45392946 chr11:45392929-45392947 chr11:45392931-45392952 chr11:45392850-45392863 chr11:45392932-45392945
18	CTCF	chr11:45392813-45393085	GM20000	blood:	n/a	chr11:45392930-45392946 chr11:45392929-45392947 chr11:45392931-45392952 chr11:45392850-45392863 chr11:45392932-45392945
19	CTCF	chr11:45392860-45393010	HBMEC	blood vessel:	n/a	chr11:45392930-45392946 chr11:45392929-45392947 chr11:45392931-45392952 chr11:45392932-45392945
20	CTCF	chr11:45392860-45393010	MCF-7	breast:	n/a	chr11:45392930-45392946 chr11:45392929-45392947 chr11:45392931-45392952 chr11:45392932-45392945
21	CTCF	chr11:45392520-45392670	AG04449	skin:	n/a	n/a
22	CTCF	chr11:45392608-45393067	ProgFib	skin:	n/a	chr11:45392930-45392946 chr11:45392929-45392947 chr11:45392931-45392952 chr11:45392850-45392863 chr11:45392932-45392945
23	CTCF	chr11:45392880-45393030	GM12865	blood:	n/a	chr11:45392930-45392946 chr11:45392929-45392947 chr11:45392931-45392952 chr11:45392932-45392945
24	CTCF	chr11:45392742-45393043	ECC-1	luminal epithelium:	n/a	chr11:45392930-45392946 chr11:45392929-45392947 chr11:45392931-45392952 chr11:45392850-45392863 chr11:45392932-45392945
25	CTCF	chr11:45392581-45392668	HUVEC	blood vessel:	n/a	n/a
26	CTCF	chr11:45392880-45393030	SK-N-SH_RA	brain:	n/a	chr11:45392930-45392946 chr11:45392929-45392947 chr11:45392931-45392952 chr11:45392932-45392945
27	CTCF	chr11:45392805-45393046	GM10248	blood:	n/a	chr11:45392930-45392946 chr11:45392929-45392947 chr11:45392931-45392952 chr11:45392850-45392863 chr11:45392932-45392945
28	CTCF	chr11:45392781-45393086	K562	blood:	n/a	chr11:45392930-45392946 chr11:45392929-45392947 chr11:45392931-45392952 chr11:45392850-45392863 chr11:45392932-45392945
29	CTCF	chr11:45392860-45393010	NHEK	skin:	n/a	chr11:45392930-45392946 chr11:45392929-45392947 chr11:45392931-45392952 chr11:45392932-45392945
30	CTCF	chr11:45392577-45393104	GM19238	blood:	n/a	chr11:45392930-45392946 chr11:45392929-45392947 chr11:45392931-45392952 chr11:45392850-45392863 chr11:45392932-45392945
31	CTCF	chr11:45392880-45393030	HCT-116	colon:	n/a	chr11:45392930-45392946 chr11:45392929-45392947 chr11:45392931-45392952 chr11:45392932-45392945
32	CTCF	chr11:45392860-45393010	HVMF	connective:	n/a	chr11:45392930-45392946 chr11:45392929-45392947 chr11:45392931-45392952 chr11:45392932-45392945
33	CTCF	chr11:45392768-45393116	SK-N-SH_RA	brain:	n/a	chr11:45392930-45392946 chr11:45392929-45392947 chr11:45392931-45392952 chr11:45392850-45392863 chr11:45392932-45392945
34	CTCF	chr11:45392880-45393030	HUVEC	blood vessel:	n/a	chr11:45392930-45392946 chr11:45392929-45392947 chr11:45392931-45392952 chr11:45392932-45392945
35	CTCF	chr11:45392743-45393143	K562	blood:	n/a	chr11:45392930-45392946 chr11:45392929-45392947 chr11:45392931-45392952 chr11:45392850-45392863 chr11:45392932-45392945
36	CTCF	chr11:45392860-45393010	NB4	blood:	n/a	chr11:45392930-45392946 chr11:45392929-45392947 chr11:45392931-45392952 chr11:45392932-45392945
37	CTCF	chr11:45392784-45393050	MCF-7	breast:	n/a	chr11:45392930-45392946 chr11:45392929-45392947 chr11:45392931-45392952 chr11:45392850-45392863 chr11:45392932-45392945
38	CTCF	chr11:45392860-45393010	GM12873	blood:	n/a	chr11:45392930-45392946 chr11:45392929-45392947 chr11:45392931-45392952 chr11:45392932-45392945
39	CTCF	chr11:45392860-45393010	NHDF-neo	bronchial:	n/a	chr11:45392930-45392946 chr11:45392929-45392947 chr11:45392931-45392952 chr11:45392932-45392945
40	CTCF	chr11:45392781-45393065	GM10266	blood:	n/a	chr11:45392930-45392946 chr11:45392929-45392947 chr11:45392931-45392952 chr11:45392850-45392863 chr11:45392932-45392945
41	CTCF	chr11:45392662-45393212	MCF-7	breast:	n/a	chr11:45392930-45392946 chr11:45392929-45392947 chr11:45392931-45392952 chr11:45392850-45392863 chr11:45392932-45392945
42	CTCF	chr11:45400060-45400210	HepG2	liver:	n/a	n/a
43	CTCF	chr11:45392860-45393010	Hela-S3	cervix:	n/a	chr11:45392930-45392946 chr11:45392929-45392947 chr11:45392931-45392952 chr11:45392932-45392945
44	CTCF	chr11:45392860-45393010	HFF	foreskin:	n/a	chr11:45392930-45392946 chr11:45392929-45392947 chr11:45392931-45392952 chr11:45392932-45392945
45	CTCF	chr11:45392860-45393010	Caco-2	colon:	n/a	chr11:45392930-45392946 chr11:45392929-45392947 chr11:45392931-45392952 chr11:45392932-45392945
46	CTCF	chr11:45392860-45393010	HPF	lung:	n/a	chr11:45392930-45392946 chr11:45392929-45392947 chr11:45392931-45392952 chr11:45392932-45392945
47	CTCF	chr11:45392793-45393072	MCF-7	breast:	n/a	chr11:45392930-45392946 chr11:45392929-45392947 chr11:45392931-45392952 chr11:45392850-45392863 chr11:45392932-45392945
48	CTCF	chr11:45392780-45393106	GM12878	blood:	n/a	chr11:45392930-45392946 chr11:45392929-45392947 chr11:45392931-45392952 chr11:45392850-45392863 chr11:45392932-45392945
49	CTCF	chr11:45392860-45393010	HRPEpiC	eye:	n/a	chr11:45392930-45392946 chr11:45392929-45392947 chr11:45392931-45392952 chr11:45392932-45392945
50	CTCF	chr11:45392880-45393030	RPTEC	kidney:	n/a	chr11:45392930-45392946 chr11:45392929-45392947 chr11:45392931-45392952 chr11:45392932-45392945

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:45392981-45393031	Jurkat	blood:	n/a
2	chr11:45392729-45392779	GM12892	blood:	n/a
3	chr11:45392566-45392616	GM12891	blood:	n/a
4	chr11:45392566-45392616	HCPEpiC	choroid plexus:	n/a
5	chr11:45392943-45392993	HAEpiC	amniotic membrane:	n/a
6	chr11:45392729-45392779	Hepatocyte	liver:	n/a
7	chr11:45392943-45392993	LNCaP	prostate:	n/a
8	chr11:45392826-45392876	NHBE	bronchial:	n/a
9	chr11:45392729-45392779	Jurkat	blood:	n/a
10	chr11:45392981-45393031	U87	brain:	n/a
11	chr11:45392826-45392876	BE2_C	brain:	n/a
12	chr11:45392826-45392876	CMK	blood:	n/a
13	chr11:45392826-45392876	GM19239	blood:	n/a
14	chr11:45392826-45392876	HNPCEpiC	eye:	n/a
15	chr11:45392826-45392876	NH-A	brain:	n/a
16	chr11:45392826-45392876	Caco-2	colon:	n/a
17	chr11:45392805-45392855	HNPCEpiC	eye:	n/a
18	chr11:45392805-45392855	K562	blood:	n/a
19	chr11:45392729-45392779	GM12891	blood:	n/a
20	chr11:45392566-45392616	HepG2	liver:	n/a
21	chr11:45392729-45392779	HIPEpiC	eye:	n/a
22	chr11:45392981-45393031	IMR90	lung:	fetal
23	chr11:45392805-45392855	HRPEpiC	eye:	n/a
24	chr11:45392805-45392855	LNCaP	prostate:	n/a
25	chr11:45392981-45393031	AG04450	lung:	fetal
26	chr11:45392566-45392616	HCF	heart:	n/a
27	chr11:45392943-45392993	HL-60	blood:	n/a
28	chr11:45392773-45392823	CMK	blood:	n/a
29	chr11:45392566-45392616	SAEC	small airway:	n/a
30	chr11:45392773-45392823	NT2-D1	testis:	n/a
31	chr11:45392805-45392855	PFSK-1	brain:	n/a
32	chr11:45392826-45392876	IMR90	lung:	fetal
33	chr11:45392826-45392876	PrEC	prostate:	n/a
34	chr11:45392773-45392823	HL-60	blood:	n/a
35	chr11:45392729-45392779	A549	lung:	n/a
36	chr11:45392826-45392876	HEK293	kidney:	embryo
37	chr11:45392566-45392616	ovcar-3	ovarian:	n/a
38	chr11:45392826-45392876	PFSK-1	brain:	n/a
39	chr11:45392773-45392823	HNPCEpiC	eye:	n/a
40	chr11:45392729-45392779	NH-A	brain:	n/a
41	chr11:45392943-45392993	PFSK-1	brain:	n/a
42	chr11:45392773-45392823	ovcar-3	ovarian:	n/a
43	chr11:45392943-45392993	CMK	blood:	n/a
44	chr11:45392566-45392616	LNCaP	prostate:	n/a
45	chr11:45392773-45392823	Caco-2	colon:	n/a
46	chr11:45392981-45393031	GM12891	blood:	n/a
47	chr11:45392805-45392855	GM12891	blood:	n/a
48	chr11:45392826-45392876	HCT-116	colon:	n/a
49	chr11:45392943-45392993	HIPEpiC	eye:	n/a
50	chr11:45392805-45392855	HCPEpiC	choroid plexus:	n/a

No.	Distal block	Cell Line	Cell type
1	chr11:45385615..45387416-chr11:45393946..45395644,2	MCF-7	breast:
2	chr11:45391422..45393195-chr11:45394967..45396876,2	K562	blood:
3	chr11:45392850..45393454-chr11:45792586..45793366,3	MCF-7	breast:
4	chr11:45392498..45393507-chr11:45792864..45793933,6	K562	blood:
5	chr11:45382525..45384893-chr11:45390829..45392427,2	MCF-7	breast:
6	chr11:45402149..45405049-chr11:45410823..45413385,2	MCF-7	breast:
7	chr11:45402149..45405049-chr11:45410823..45413385,2	MCF-7	breast:
8	chr11:45392639..45393338-chr11:45792530..45793432,2	MCF-7	breast:
9	chr11:45413154..45414877-chr11:45416826..45419299,2	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-PRDM11-4	chr11:45400906-45401138	XLOC_009121
2	lnc-PRDM11-4	chr11:45392948-45394391	XLOC_009121
3	lnc-PRDM11-4	chr11:45408778-45408860	XLOC_009121
4	lnc-SYT13-3	chr11:45408766-45408836	ENSG00000255041
5	lnc-PRDM11-4	chr11:45392964-45393676	ENSG00000255267.2
6	lnc-PRDM11-4	chr11:45401486-45401689	XLOC_009121
7	lnc-PRDM11-4	chr11:45409427-45410059	XLOC_009121

Variant related genes	Relation type
ENSG00000255267	TF binding region
ENSG00000255267	CpG island
ENSG00000255267	chromatin interactions
ENSG00000205106	chromatin interactions

Extended variants
information (count: 967 )
Associated
traits (count: 60 )

Variant overlapped rSNPs/rCNVs (count:967 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs11601710	chr11:45389225-45389226	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs548977882	chr11:45389286-45389287	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs565969504	chr11:45389387-45389388	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs571126577	chr11:45389396-45389397	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs559564177	chr11:45389402-45389403	Weak transcription Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
6	rs534671384	chr11:45389432-45389433	Weak transcription Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
7	rs1868910	chr11:45389464-45389465	Weak transcription Enhancers Bivalent Enhancer	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
8	rs72897452	chr11:45389470-45389471	Weak transcription Enhancers Bivalent Enhancer	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs200509118	chr11:45389539-45389540	Weak transcription Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
10	rs61882568	chr11:45389550-45389551	Weak transcription Enhancers Bivalent Enhancer	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs150598745	chr11:45389570-45389571	Weak transcription Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
12	rs192769849	chr11:45389602-45389603	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs370994786	chr11:45389612-45389613	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs139612997	chr11:45389679-45389680	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs549056406	chr11:45389680-45389681	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs553348428	chr11:45389721-45389722	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs118144598	chr11:45389726-45389727	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs60920162	chr11:45389738-45389739	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
19	rs74545329	chr11:45389770-45389771	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs534584821	chr11:45389788-45389789	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs149672939	chr11:45389794-45389795	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs376679663	chr11:45389879-45389880	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs145443510	chr11:45389955-45389956	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs543509104	chr11:45390015-45390016	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs184796987	chr11:45390026-45390027	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs546297159	chr11:45390054-45390055	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs189351553	chr11:45390110-45390111	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs373923266	chr11:45390278-45390279	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs542817931	chr11:45390342-45390343	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs61882569	chr11:45390367-45390368	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs559379826	chr11:45390391-45390392	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs191131769	chr11:45390425-45390426	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs551340495	chr11:45390492-45390493	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs571343489	chr11:45390502-45390503	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs7130052	chr11:45390519-45390520	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
36	rs368492765	chr11:45390543-45390544	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs374911866	chr11:45390581-45390582	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs201561049	chr11:45390588-45390589	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs142268783	chr11:45390597-45390598	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs544510745	chr11:45390620-45390621	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs61882570	chr11:45390634-45390635	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
42	rs372206849	chr11:45390665-45390666	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs189224593	chr11:45390680-45390681	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs139571694	chr11:45390730-45390731	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs540576144	chr11:45390773-45390774	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
46	rs181596103	chr11:45390816-45390817	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
47	rs185309495	chr11:45390851-45390852	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
48	rs79849724	chr11:45390896-45390897	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs577684728	chr11:45390909-45390910	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs551593842	chr11:45390945-45390946	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:60)

Disease	PMID	Source
Parathyroid adenoma	22454399	CNVD
Medulloblastoma	21979893	CNVD
Chordoma	21602918	CNVD
Breast cancer	21949216	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	19222835	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Beckwith-Wiedemann syndrome	21518781	CNVD
Wilms tumour	21518781	CNVD
Hepatoblastoma	21518781	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Wilms tumour	21544195	CNVD
Gastric cancer	17908304	CNVD
Multiple myeloma	20724749	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	21785460	CNVD
Medulloblastoma	16783165	CNVD
Renal cell carcinoma	18194544	CNVD
Breast cancer	17603634	CNVD
Chordoma	18071362	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	21364760	CNVD
Potocki-Shaffer syndrome	19222835	CNVD
WAGR syndrome	19222835	CNVD
small cell lung cancer	20016488	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Myelofibrosis	22110671	CNVD
Melanoma	18172304	CNVD
Intracranial ependymoma	16609018	CNVD
Myxofibrosarcoma	16751306	CNVD
Potocki-Shaffer syndrome	22470819	CNVD
Neurodevelopmental disorder	22521361	CNVD
Breast cancer	16608533	CNVD
Hirschsprung''s Disease	21712996	CNVD
Follicular lymphoma	20505157	CNVD
Colorectal cancer	21128281	CNVD
Breast cancer	20409316	CNVD
Neurocytoma	17123091	CNVD
Central neurocytomas	17123091	CNVD
Multiple myeloma	16616336	CNVD
Cancer	17160897	CNVD
Mantle cell lymphoma	19029149	CNVD
Glioblastoma multiforme	21138945	CNVD
Prostate cancer	18632612	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Glioma	20126413	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:442 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:45386800-45391000	Weak transcription	Ovary	ovary
2	chr11:45387800-45389400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr11:45387800-45389400	Enhancers	Fetal Brain Female	brain
4	chr11:45388000-45389800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
5	chr11:45388000-45392200	Weak transcription	Brain Angular Gyrus	brain
6	chr11:45388200-45389400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr11:45388400-45391000	Weak transcription	Brain Inferior Temporal Lobe	brain
8	chr11:45388400-45392400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
9	chr11:45388400-45395800	Weak transcription	Liver	Liver
10	chr11:45388800-45389600	Enhancers	Lung	lung
11	chr11:45388800-45392600	Weak transcription	Brain Anterior Caudate	brain
12	chr11:45389000-45390800	Weak transcription	Brain Germinal Matrix	brain
13	chr11:45389000-45391000	Weak transcription	Brain Cingulate Gyrus	brain
14	chr11:45389000-45391000	Weak transcription	Fetal Brain Male	brain
15	chr11:45389000-45392200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
16	chr11:45389000-45392600	Weak transcription	Spleen	Spleen
17	chr11:45389400-45389600	Bivalent Enhancer	Duodenum Mucosa	Duodenum
18	chr11:45389400-45391000	Weak transcription	Fetal Brain Female	brain
19	chr11:45389400-45392600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
20	chr11:45389600-45392600	Weak transcription	Lung	lung
21	chr11:45389800-45391000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
22	chr11:45390800-45391200	Enhancers	Brain Germinal Matrix	brain
23	chr11:45391000-45391200	Bivalent Enhancer	H1 Cell Line	embryonic stem cell
24	chr11:45391000-45391200	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
25	chr11:45391000-45391200	Bivalent Enhancer	Fetal Intestine Small	intestine
26	chr11:45391000-45391200	Bivalent Enhancer	Fetal Stomach	stomach
27	chr11:45391000-45391200	Bivalent Enhancer	Skeletal Muscle Male	skeletal muscle
28	chr11:45391000-45391400	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
29	chr11:45391000-45391400	Enhancers	Brain Cingulate Gyrus	brain
30	chr11:45391000-45391400	Enhancers	Brain Inferior Temporal Lobe	brain
31	chr11:45391000-45391400	Bivalent Enhancer	Fetal Muscle Leg	muscle
32	chr11:45391000-45391600	Enhancers	Ovary	ovary
33	chr11:45391000-45391800	Enhancers	Fetal Brain Male	brain
34	chr11:45391000-45391800	Enhancers	Fetal Brain Female	brain
35	chr11:45391200-45391400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
36	chr11:45391200-45391400	Bivalent Enhancer	Cortex derived primary cultured neurospheres	brain
37	chr11:45391200-45391400	Bivalent Enhancer	Fetal Muscle Trunk	muscle
38	chr11:45391400-45392600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
39	chr11:45391400-45392600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
40	chr11:45391400-45392600	Weak transcription	Brain Cingulate Gyrus	brain
41	chr11:45391400-45392600	Weak transcription	Brain Inferior Temporal Lobe	brain
42	chr11:45391600-45391800	Bivalent Enhancer	Stomach Smooth Muscle	stomach
43	chr11:45391600-45392800	Weak transcription	Ovary	ovary
44	chr11:45391800-45392800	Weak transcription	Fetal Brain Female	brain
45	chr11:45391800-45393000	Weak transcription	Fetal Brain Male	brain
46	chr11:45392200-45392600	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
47	chr11:45392200-45393000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
48	chr11:45392200-45393200	Enhancers	Brain Angular Gyrus	brain
49	chr11:45392400-45392800	Enhancers	HUES64 Cell Line	embryonic stem cell
50	chr11:45392400-45393000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links