No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs16962159 |
chr15:49529302-49529303 |
Weak transcription Enhancers Flanking Active TSS Active TSS
|
TF binding region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
2 |
rs75801154 |
chr15:49529333-49529334 |
Weak transcription Enhancers Flanking Active TSS Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs190000446 |
chr15:49529509-49529510 |
Weak transcription Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs182664750 |
chr15:49529529-49529530 |
Weak transcription Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs147051170 |
chr15:49529539-49529540 |
Weak transcription Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs372635518 |
chr15:49529540-49529541 |
Weak transcription Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs188282129 |
chr15:49529546-49529547 |
Weak transcription Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs541631188 |
chr15:49529559-49529560 |
Weak transcription Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs192826344 |
chr15:49529562-49529563 |
Weak transcription Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs555426536 |
chr15:49529568-49529569 |
Weak transcription Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs183744969 |
chr15:49529642-49529643 |
Weak transcription Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs148034343 |
chr15:49529643-49529644 |
Weak transcription Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs202146763 |
chr15:49529646-49529647 |
Weak transcription Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs141731693 |
chr15:49529647-49529648 |
Weak transcription Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs540652929 |
chr15:49529651-49529652 |
Weak transcription Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs112279985 |
chr15:49529696-49529697 |
Weak transcription Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs562195896 |
chr15:49529713-49529714 |
Weak transcription Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs538552648 |
chr15:49529734-49529735 |
Weak transcription Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs188665914 |
chr15:49529745-49529746 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
20 |
rs550730722 |
chr15:49529766-49529767 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
21 |
rs377633402 |
chr15:49529829-49529830 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
22 |
rs371046030 |
chr15:49529830-49529831 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
23 |
rs569096008 |
chr15:49529862-49529863 |
Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
24 |
rs376017226 |
chr15:49529949-49529950 |
Weak transcription Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs533278684 |
chr15:49529957-49529958 |
Weak transcription Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs368575560 |
chr15:49529963-49529964 |
Weak transcription Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs557136097 |
chr15:49529988-49529989 |
Weak transcription Enhancers
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs16962163 |
chr15:49530006-49530007 |
Weak transcription Enhancers Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
29 |
rs12908394 |
chr15:49530039-49530040 |
Weak transcription Enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs546497967 |
chr15:49530041-49530042 |
Weak transcription Enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs564652635 |
chr15:49530048-49530049 |
Weak transcription Enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs114049500 |
chr15:49530129-49530130 |
Weak transcription Enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs540306893 |
chr15:49530138-49530139 |
Weak transcription Enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs533902279 |
chr15:49530181-49530182 |
Weak transcription Enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs553253436 |
chr15:49530256-49530257 |
Weak transcription Enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs386783855 |
chr15:49530272-49530273 |
Weak transcription Enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs111875610 |
chr15:49530284-49530285 |
Weak transcription Enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs11632303 |
chr15:49530321-49530322 |
Weak transcription Enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
39 |
rs193232608 |
chr15:49530323-49530324 |
Weak transcription Enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs184825086 |
chr15:49530325-49530326 |
Weak transcription Enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs557844697 |
chr15:49530369-49530370 |
Weak transcription Enhancers Flanking Active TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs572798192 |
chr15:49530409-49530410 |
Weak transcription Enhancers Flanking Active TSS Strong transcription
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs539820075 |
chr15:49530488-49530489 |
Weak transcription Enhancers Flanking Active TSS Strong transcription
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs562422129 |
chr15:49530534-49530535 |
Weak transcription Enhancers Flanking Active TSS Strong transcription
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs529596306 |
chr15:49530539-49530540 |
Weak transcription Enhancers Flanking Active TSS Strong transcription
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs16962166 |
chr15:49530598-49530599 |
Weak transcription Enhancers Flanking Active TSS Strong transcription
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
47 |
rs188122365 |
chr15:49530676-49530677 |
Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs562790088 |
chr15:49530713-49530714 |
Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs369470410 |
chr15:49530815-49530816 |
Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs3105858 |
chr15:49530823-49530824 |
Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|