Variant report

Variant nsv827340
Chromosome Location chr15:56298487-56302591
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:56292400-56298800 Weak transcription A549 lung
2 chr15:56295000-56298600 Weak transcription HMEC breast
3 chr15:56295000-56298800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr15:56295000-56298800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr15:56295000-56299000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr15:56296800-56299000 Weak transcription K562 blood
7 chr15:56298200-56298800 Enhancers Breast Myoepithelial Primary Cells Breast
8 chr15:56298200-56298800 Enhancers Placenta Placenta
9 chr15:56298400-56298800 Enhancers NHEK skin
10 chr15:56298400-56299600 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr15:56298400-56300000 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr15:56298600-56298800 Enhancers HMEC breast
13 chr15:56298600-56299800 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
14 chr15:56298600-56299800 Active TSS Muscle Satellite Cultured Cells --
15 chr15:56298600-56299800 Active TSS Brain Inferior Temporal Lobe brain
16 chr15:56298600-56300000 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr15:56298800-56299000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr15:56298800-56299200 Flanking Active TSS A549 lung
19 chr15:56298800-56299200 Flanking Active TSS HMEC breast
20 chr15:56298800-56299200 Flanking Active TSS NHEK skin
21 chr15:56298800-56299400 Active TSS Aorta Aorta
22 chr15:56298800-56299400 Active TSS Brain Hippocampus Middle brain
23 chr15:56298800-56299800 Active TSS Breast Myoepithelial Primary Cells Breast
24 chr15:56298800-56299800 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
25 chr15:56298800-56299800 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr15:56298800-56299800 Active TSS Duodenum Mucosa Duodenum
27 chr15:56298800-56299800 Active TSS Placenta Placenta
28 chr15:56298800-56299800 Active TSS Ovary ovary
29 chr15:56298800-56299800 Active TSS HSMM muscle
30 chr15:56298800-56299800 Active TSS HSMMtube muscle
31 chr15:56298800-56299800 Active TSS HUVEC blood vessel
32 chr15:56298800-56299800 Active TSS Osteobl bone
33 chr15:56298800-56300000 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
34 chr15:56298800-56300000 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr15:56298800-56300000 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
36 chr15:56298800-56300000 Active TSS Stomach Smooth Muscle stomach
37 chr15:56298800-56300000 Active TSS NHDF-Ad bronchial
38 chr15:56298800-56300000 Active TSS NHLF lung
39 chr15:56299000-56299200 Flanking Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr15:56299000-56299400 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr15:56299000-56299400 Active TSS Esophagus oesophagus
42 chr15:56299000-56299600 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
43 chr15:56299000-56299600 Enhancers K562 blood
44 chr15:56299000-56299800 Active TSS ES-WA7 Cell Line embryonic stem cell
45 chr15:56299000-56299800 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
46 chr15:56299000-56299800 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr15:56299000-56299800 Active TSS Adipose Nuclei Adipose
48 chr15:56299000-56299800 Active TSS Brain Anterior Caudate brain
49 chr15:56299000-56299800 Active TSS Brain Dorsolateral Prefrontal Cortex brain
50 chr15:56299000-56299800 Active TSS Fetal Brain Female brain

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