Variant report

Variant	nsv831644
Chromosome Location	chr9:86534310-86704395
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:4389)
CpG islands
(count:1959)
Chromatin interactive
region (count:166)
LncRNA
region (count:14)
Mature miRNA
region (count: 2)
miRNA target
sites (count:2)

(count:4389 , 50 per page) page: 1 2 3 4 5 6 7 ... 88

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:86597156-86597200	HepG2	liver:	n/a	n/a
2	ARID3A	chr9:86601207-86602382	K562	blood:	n/a	n/a
3	ARID3A	chr9:86594976-86595467	K562	blood:	n/a	n/a
4	ARID3A	chr9:86596449-86596840	K562	blood:	n/a	n/a
5	ARID3A	chr9:86607103-86607790	K562	blood:	n/a	n/a
6	ARID3A	chr9:86571380-86571827	HepG2	liver:	n/a	n/a
7	ARID3A	chr9:86626639-86626694	K562	blood:	n/a	n/a
8	ARID3A	chr9:86594551-86595923	HepG2	liver:	n/a	n/a
9	ARID3A	chr9:86669576-86669976	HepG2	liver:	n/a	n/a
10	ARID3A	chr9:86574100-86574109	HepG2	liver:	n/a	n/a
11	ARID3A	chr9:86607253-86607942	HepG2	liver:	n/a	n/a
12	ARID3A	chr9:86535494-86536921	HepG2	liver:	n/a	n/a
13	ARID3A	chr9:86579582-86579944	K562	blood:	n/a	n/a
14	ARID3A	chr9:86578453-86578585	HepG2	liver:	n/a	n/a
15	ARID3A	chr9:86601213-86602730	HepG2	liver:	n/a	n/a
16	ARID3A	chr9:86581470-86581472	HepG2	liver:	n/a	n/a
17	ARID3A	chr9:86597040-86597385	K562	blood:	n/a	n/a
18	ATF1	chr9:86579533-86579865	K562	blood:	n/a	n/a
19	ATF1	chr9:86597081-86597370	K562	blood:	n/a	n/a
20	ATF1	chr9:86594482-86595795	K562	blood:	n/a	n/a
21	ATF2	chr9:86580202-86581672	GM12878	blood:	n/a	n/a
22	ATF2	chr9:86581755-86582464	H1-hESC	embryonic stem cell:	n/a	n/a
23	ATF2	chr9:86579550-86580178	GM12878	blood:	n/a	n/a
24	ATF2	chr9:86535405-86536155	GM12878	blood:	n/a	n/a
25	ATF2	chr9:86580506-86581613	H1-hESC	embryonic stem cell:	n/a	n/a
26	ATF2	chr9:86580548-86581216	GM12878	blood:	n/a	n/a
27	ATF2	chr9:86594569-86595833	H1-hESC	embryonic stem cell:	n/a	n/a
28	ATF2	chr9:86595246-86595897	GM12878	blood:	n/a	n/a
29	ATF2	chr9:86535356-86536066	GM12878	blood:	n/a	n/a
30	ATF2	chr9:86579548-86580083	GM12878	blood:	n/a	n/a
31	ATF2	chr9:86594042-86596447	GM12878	blood:	n/a	n/a
32	ATF2	chr9:86535464-86536111	H1-hESC	embryonic stem cell:	n/a	n/a
33	ATF2	chr9:86535487-86536085	H1-hESC	embryonic stem cell:	n/a	n/a
34	ATF2	chr9:86594095-86595833	H1-hESC	embryonic stem cell:	n/a	n/a
35	ATF2	chr9:86594320-86594737	GM12878	blood:	n/a	n/a
36	ATF3	chr9:86577106-86577655	HCT-116	colon:	n/a	n/a
37	ATF3	chr9:86595014-86595833	A549	lung:	n/a	chr9:86595620-86595629
38	ATF3	chr9:86594732-86595905	A549	lung:	n/a	chr9:86595872-86595881 chr9:86595620-86595629
39	BACH1	chr9:86535776-86536716	H1-hESC	embryonic stem cell:	n/a	n/a
40	BACH1	chr9:86595351-86595999	H1-hESC	embryonic stem cell:	n/a	n/a
41	BACH1	chr9:86596582-86597119	K562	blood:	n/a	n/a
42	BACH1	chr9:86596642-86596737	H1-hESC	embryonic stem cell:	n/a	n/a
43	BACH1	chr9:86669741-86669772	H1-hESC	embryonic stem cell:	n/a	n/a
44	BATF	chr9:86547907-86548108	GM12878	blood:	n/a	n/a
45	BATF	chr9:86547853-86548109	GM12878	blood:	n/a	n/a
46	BATF	chr9:86535650-86536027	GM12878	blood:	n/a	n/a
47	BATF	chr9:86595412-86595753	GM12878	blood:	n/a	n/a
48	BATF	chr9:86664623-86664866	GM12878	blood:	n/a	n/a
49	BCL11A	chr9:86535684-86536658	GM12878	blood:	n/a	chr9:86536409-86536422 chr9:86536253-86536266
50	BCL11A	chr9:86535614-86536076	GM12878	blood:	n/a	n/a

(count:1959 , 50 per page) page: 1 2 3 4 5 6 7 ... 40

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:86594226-86594276	SAEC	small airway:	n/a
2	chr9:86535572-86535622	PrEC	prostate:	n/a
3	chr9:86597173-86597223	CMK	blood:	n/a
4	chr9:86571409-86571459	NB4	blood:	n/a
5	chr9:86569098-86569148	RPTEC	kidney:	n/a
6	chr9:86595816-86595866	GM06990	blood:	n/a
7	chr9:86596124-86596174	Hepatocyte	liver:	n/a
8	chr9:86594226-86594276	SAEC	small airway:	n/a
9	chr9:86535572-86535622	PrEC	prostate:	n/a
10	chr9:86597173-86597223	CMK	blood:	n/a
11	chr9:86571409-86571459	NB4	blood:	n/a
12	chr9:86569098-86569148	RPTEC	kidney:	n/a
13	chr9:86595816-86595866	GM06990	blood:	n/a
14	chr9:86596124-86596174	Hepatocyte	liver:	n/a
15	chr9:86597173-86597223	H1-hESC	embryonic stem cell:	embryo
16	chr9:86536028-86536078	SKMC	muscle:	n/a
17	chr9:86596281-86596331	HL-60	blood:	n/a
18	chr9:86596281-86596331	GM19239	blood:	n/a
19	chr9:86536513-86536563	ovcar-3	ovarian:	n/a
20	chr9:86595151-86595201	MCF-7	breast:	n/a
21	chr9:86536028-86536078	HPAEpiC	pulmonary alveolar:	n/a
22	chr9:86595452-86595502	AG09319	gingival:	n/a
23	chr9:86594226-86594276	HCPEpiC	choroid plexus:	n/a
24	chr9:86596124-86596174	HCPEpiC	choroid plexus:	n/a
25	chr9:86595264-86595314	SK-N-SH	brain:	n/a
26	chr9:86596124-86596174	PrEC	prostate:	n/a
27	chr9:86594226-86594276	GM19239	blood:	n/a
28	chr9:86594803-86594853	GM19239	blood:	n/a
29	chr9:86615267-86615317	HPAEpiC	pulmonary alveolar:	n/a
30	chr9:86536028-86536078	AG10803	skin:	n/a
31	chr9:86536043-86536093	GM12878	blood:	n/a
32	chr9:86571432-86571482	HAEpiC	amniotic membrane:	n/a
33	chr9:86573761-86573811	ECC-1	luminal epithelium:	n/a
34	chr9:86571814-86571864	SK-N-MC	brain:	n/a
35	chr9:86594091-86594141	PrEC	prostate:	n/a
36	chr9:86594889-86594939	Hela-S3	cervix:	n/a
37	chr9:86595816-86595866	NHBE	bronchial:	n/a
38	chr9:86595264-86595314	HRE	kidney:	n/a
39	chr9:86594416-86594466	GM12878	blood:	n/a
40	chr9:86535695-86535745	Caco-2	colon:	n/a
41	chr9:86571409-86571459	HPAEpiC	pulmonary alveolar:	n/a
42	chr9:86571432-86571482	NT2-D1	testis:	n/a
43	chr9:86571814-86571864	GM12891	blood:	n/a
44	chr9:86573761-86573811	SKMC	muscle:	n/a
45	chr9:86594214-86594264	SK-N-MC	brain:	n/a
46	chr9:86536043-86536093	BE2_C	brain:	n/a
47	chr9:86536513-86536563	IMR90	lung:	fetal
48	chr9:86594214-86594264	U87	brain:	n/a
49	chr9:86535755-86535805	AoSMC	blood vessel:	n/a
50	chr9:86535572-86535622	T-47D	breast:	n/a

(count:166 , 50 per page) page: 1 2 3 4

No.	Distal block	Cell Line	Cell type
1	chr9:86638379..86640240-chr9:86737757..86739291,2	K562	blood:
2	chr9:86570737..86572270-chr9:86573976..86575561,2	K562	blood:
3	chr4:56412226..56412922-chr9:86594760..86595405,2	HCT-116	colon:
4	chr9:86611159..86613982-chr9:86615279..86618286,3	MCF-7	breast:
5	chr9:86535234..86536021-chr9:86875727..86876675,2	MCF-7	breast:
6	chr9:86671448..86673966-chr9:86679778..86681333,2	MCF-7	breast:
7	chr9:86531254..86532896-chr9:86534357..86536311,2	MCF-7	breast:
8	chr9:86534520..86537940-chr9:86592614..86595774,6	K562	blood:
9	chr9:86533593..86537892-chr9:86593047..86598677,10	K562	blood:
10	chr9:86552635..86553455-chr9:86929530..86930770,4	MCF-7	breast:
11	chr17:80250206..80251061-chr9:86594587..86595234,2	Hela-S3	cervix:
12	chr9:86534483..86536598-chr9:86598501..86601321,2	MCF-7	breast:
13	chr8:53372582..53373541-chr9:86594741..86595608,2	Hela-S3	cervix:
14	chr18:12376849..12377806-chr9:86594670..86595620,2	Hela-S3	cervix:
15	chr9:86593375..86596264-chr9:101558546..101560057,2	MCF-7	breast:
16	chr9:86237033..86239481-chr9:86571525..86573399,2	MCF-7	breast:
17	chr1:28974640..28975500-chr9:86535654..86536400,2	Hela-S3	cervix:
18	chr12:77272410..77273249-chr9:86594788..86595326,2	Hela-S3	cervix:
19	chr9:86562110..86564008-chr9:86566569..86568796,2	K562	blood:
20	chr9:86552562..86553446-chr9:86787709..86788677,4	K562	blood:
21	chr7:98922926..98923573-chr9:86571634..86572370,2	Hela-S3	cervix:
22	chr9:86431003..86433746-chr9:86534377..86536332,2	K562	blood:
23	chr20:30192630..30193506-chr9:86594310..86595123,2	Hela-S3	cervix:
24	chr10:43931809..43932733-chr9:86594490..86595462,2	Hela-S3	cervix:
25	chr9:86611159..86613982-chr9:86615279..86618286,3	MCF-7	breast:
26	chr15:66796716..66797533-chr9:86595214..86595851,2	Hela-S3	cervix:
27	chr9:86535076..86537991-chr9:86590146..86593000,2	K562	blood:
28	chr9:86533593..86537892-chr9:86593047..86598677,10	K562	blood:
29	chr9:86535411..86537432-chr9:127629716..127632471,2	MCF-7	breast:
30	chr9:86549593..86551703-chr9:86556254..86557805,2	MCF-7	breast:
31	chr10:90639734..90640291-chr9:86595257..86596036,2	Hela-S3	cervix:
32	chr9:86549593..86551703-chr9:86556254..86557805,2	MCF-7	breast:
33	chr9:86552677..86553242-chr9:86929937..86930812,2	K562	blood:
34	chr6:33359301..33359882-chr9:86594730..86595587,2	Hela-S3	cervix:
35	chr9:86542024..86543859-chr9:86595135..86597329,2	MCF-7	breast:
36	chr9:86621080..86624737-chr9:86626977..86631058,3	MCF-7	breast:
37	chr9:86551919..86553846-chr9:86578831..86580851,2	K562	blood:
38	chr9:86561198..86563897-chr9:86600302..86603108,2	MCF-7	breast:
39	chr11:18655371..18656340-chr9:86595063..86595728,2	NB4	blood:
40	chr12:56510343..56511008-chr9:86594409..86595109,2	Hela-S3	cervix:
41	chr9:86430622..86432919-chr9:86535075..86537489,2	MCF-7	breast:
42	chr9:86534520..86537940-chr9:86592614..86595774,6	K562	blood:
43	chr9:86693838..86695435-chr9:86695774..86698504,2	MCF-7	breast:
44	chr9:86569088..86571994-chr9:86618139..86620205,2	K562	blood:
45	chr9:86594505..86596949-chr9:86620921..86622582,2	MCF-7	breast:
46	chr9:86693838..86695435-chr9:86695774..86698504,2	MCF-7	breast:
47	chr5:133560806..133561386-chr9:86594639..86595588,2	Hela-S3	cervix:
48	chr9:86566551..86568592-chr9:86569030..86570936,2	K562	blood:
49	chr9:86551370..86553240-chr9:86557554..86559080,2	MCF-7	breast:
50	chr9:86592736..86597542-chr9:86606160..86610925,6	K562	blood:

(count:14 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-RMI1-2	chr9:86698867-86699316	ENSG00000227463.2
2	lnc-RMI1-2	chr9:86678358-86678444	NONHSAT132769
3	lnc-RMI1-2	chr9:86697386-86697691	ENSG00000227463.2
4	lnc-RMI1-2	chr9:86690343-86690763	ENSG00000227463.2
5	lnc-RMI1-2	chr9:86692821-86693002	ENSG00000227463.2
6	lnc-RMI1-2	chr9:86690576-86690763	ENSG00000227463.1
7	lnc-RMI1-2	chr9:86696853-86696924	ENSG00000227463.2
8	lnc-RMI1-1	chr9:86590348-86590692	ENSG00000235298.1
9	lnc-RMI1-8	chr9:86693499-86693772	NONHSAT132772
10	lnc-RMI1-2	chr9:86678358-86678444	ENSG00000227463.2
11	lnc-RMI1-2	chr9:86697386-86697691	ENSG00000227463.1
12	lnc-RMI1-1	chr9:86587148-86587192	ENSG00000235298.1
13	lnc-RMI1-2	chr9:86696853-86696907	ENSG00000227463.1
14	lnc-RMI1-2	chr9:86682210-86682342	ENSG00000227463.2

miRNA name	Chromosome Location	mirBase accession
hsa-miR-7-1-3p	chr9:86584686-86584707	MIMAT0004553
hsa-miR-7-5p	chr9:86584727-86584749	MIMAT0000252_2

(count:2 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	HNRNPK	hsa-miR-21-5p	chr9:86583583-86583604
2	HNRNPK	hsa-miR-30c-5p	chr9:86584206-86584228

Variant related genes	Relation type
KIF27	TF binding region
C9orf64	TF binding region
MIR7-1	TF binding region
RMI1	TF binding region
ENSG00000270166	TF binding region
ENSG00000227463	TF binding region
ENSG00000202523	TF binding region
HNRNPK	TF binding region
ENSG00000235298	TF binding region
KIF27	CpG island
C9orf64	CpG island
MIR7-1	CpG island
RMI1	CpG island
ENSG00000270166	CpG island
ENSG00000227463	CpG island
ENSG00000202523	CpG island
HNRNPK	CpG island
ENSG00000235298	CpG island
ENSG00000179604	chromatin interactions
ENSG00000179119	chromatin interactions
ENSG00000141140	chromatin interactions
ENSG00000165138	chromatin interactions
ENSG00000202523	chromatin interactions
ENSG00000136950	chromatin interactions
ENSG00000173548	chromatin interactions
ENSG00000241685	chromatin interactions
ENSG00000111678	chromatin interactions
ENSG00000166192	chromatin interactions
ENSG00000055044	chromatin interactions
ENSG00000148057	chromatin interactions
ENSG00000066933	chromatin interactions
ENSG00000238923	chromatin interactions
ENSG00000164081	chromatin interactions
ENSG00000199377	chromatin interactions
ENSG00000166441	chromatin interactions
ENSG00000237649	chromatin interactions
ENSG00000179523	chromatin interactions
ENSG00000174444	chromatin interactions
ENSG00000135018	chromatin interactions
ENSG00000165118	chromatin interactions
ENSG00000271885	chromatin interactions
ENSG00000164211	chromatin interactions
ENSG00000143164	chromatin interactions
ENSG00000083223	chromatin interactions
ENSG00000124164	chromatin interactions
ENSG00000243660	chromatin interactions
ENSG00000147488	chromatin interactions
ENSG00000165115	chromatin interactions
ENSG00000178966	chromatin interactions
ENSG00000134294	chromatin interactions
ENSG00000163584	chromatin interactions
ENSG00000226471	chromatin interactions
ENSG00000177971	chromatin interactions
ENSG00000254473	chromatin interactions
ENSG00000184886	chromatin interactions
ENSG00000100219	chromatin interactions
ENSG00000165119	chromatin interactions
ENSG00000062716	chromatin interactions
ENSG00000105939	chromatin interactions
ENSG00000206597	chromatin interactions
ENSG00000225733	chromatin interactions
ENSG00000125968	chromatin interactions
ENSG00000177463	chromatin interactions
ENSG00000180771	chromatin interactions
ENSG00000103253	chromatin interactions
ENSG00000265692	chromatin interactions
ENSG00000163882	chromatin interactions
ENSG00000143158	chromatin interactions
ENSG00000236514	chromatin interactions
ENSG00000134852	chromatin interactions
ENSG00000270103	chromatin interactions
ENSG00000175183	chromatin interactions
ENSG00000165113	chromatin interactions
ENSG00000156508	chromatin interactions
ENSG00000138134	chromatin interactions
ENSG00000214756	chromatin interactions
ENSG00000197506	chromatin interactions
ENSG00000229117	chromatin interactions
ENSG00000198105	chromatin interactions
ENSG00000223247	chromatin interactions
ENSG00000182809	chromatin interactions
ENSG00000105538	chromatin interactions
ENSG00000228393	chromatin interactions
ENSG00000162004	chromatin interactions
ENSG00000174442	chromatin interactions
ENSG00000141385	chromatin interactions
ENSG00000133316	chromatin interactions
ENSG00000113575	chromatin interactions
CTC1	Mature miRNA region
TBC1D1	Mature miRNA region
SMS	Mature miRNA region
CDC5L	Mature miRNA region
ZNF792	Mature miRNA region
HUWE1	Mature miRNA region
CIRH1A	Mature miRNA region

Extended variants
information (count: 4846 )
Associated
traits (count: 74 )

Variant overlapped rSNPs/rCNVs (count:4846 , 50 per page) page: 1 2 3 4 5 6 7 ... 97

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs76241597	chr9:86534325-86534326	Weak transcription Strong transcription	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
2	rs553977012	chr9:86534339-86534340	Weak transcription Strong transcription	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
3	rs77131584	chr9:86534377-86534378	Weak transcription Strong transcription	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
4	rs116452789	chr9:86534424-86534425	Weak transcription Strong transcription	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
5	rs535406132	chr9:86534428-86534429	Weak transcription Strong transcription	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
6	rs553896529	chr9:86534457-86534458	Weak transcription Strong transcription	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
7	rs10868072	chr9:86534480-86534481	Weak transcription Strong transcription	TF binding region Chromatin interactive region	9 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
8	rs539273733	chr9:86534498-86534499	Weak transcription Strong transcription	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
9	rs537144904	chr9:86534511-86534512	Weak transcription Strong transcription	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
10	rs557425036	chr9:86534512-86534513	Weak transcription Strong transcription	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
11	rs143236949	chr9:86534521-86534522	Weak transcription Strong transcription	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
12	rs75650992	chr9:86534523-86534524	Weak transcription Strong transcription	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
13	rs62565772	chr9:86534525-86534526	Weak transcription Strong transcription	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
14	rs543363667	chr9:86534548-86534549	Weak transcription Strong transcription	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
15	rs561553678	chr9:86534575-86534576	Weak transcription Strong transcription	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
16	rs575045418	chr9:86534614-86534615	Weak transcription Enhancers	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
17	rs150865708	chr9:86534730-86534731	Weak transcription Enhancers	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
18	rs377332383	chr9:86534737-86534738	Weak transcription Enhancers	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
19	rs11140294	chr9:86534759-86534760	Weak transcription Enhancers	TF binding region Chromatin interactive region	9 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
20	rs562174895	chr9:86534821-86534822	Weak transcription Enhancers	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
21	rs560798778	chr9:86534823-86534824	Weak transcription Enhancers	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
22	rs527885743	chr9:86534877-86534878	Weak transcription Enhancers	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
23	rs530802729	chr9:86534916-86534917	Weak transcription Enhancers	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
24	rs184003393	chr9:86534942-86534943	Weak transcription Enhancers	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
25	rs537337259	chr9:86534955-86534956	Weak transcription Enhancers	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
26	rs36105215	chr9:86535019-86535020	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
27	rs564533096	chr9:86535044-86535045	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
28	rs112185476	chr9:86535111-86535112	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
29	rs550119531	chr9:86535129-86535130	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
30	rs34011003	chr9:86535147-86535148	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
31	rs544642043	chr9:86535174-86535175	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
32	rs368765850	chr9:86535186-86535187	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
33	rs185987856	chr9:86535196-86535197	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
34	rs79194828	chr9:86535233-86535234	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
35	rs575307624	chr9:86535299-86535300	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
36	rs547353444	chr9:86535355-86535356	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
37	rs190498129	chr9:86535357-86535358	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
38	rs182669203	chr9:86535390-86535391	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
39	rs374267503	chr9:86535391-86535392	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
40	rs78070537	chr9:86535402-86535403	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
41	rs187037965	chr9:86535447-86535448	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
42	rs192817572	chr9:86535462-86535463	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
43	rs368340276	chr9:86535479-86535480	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
44	rs371610565	chr9:86535548-86535549	Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
45	rs149650726	chr9:86535658-86535659	Active TSS Flanking Active TSS Weak transcription Enhancers	Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
46	rs541072071	chr9:86535662-86535663	Active TSS Flanking Active TSS Weak transcription Enhancers	Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
47	rs182646065	chr9:86535682-86535683	Active TSS Flanking Active TSS Weak transcription Enhancers	Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
48	rs572787049	chr9:86535688-86535689	Active TSS Flanking Active TSS Weak transcription Enhancers	Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
49	rs144388444	chr9:86535695-86535696	Active TSS Flanking Active TSS Weak transcription Enhancers	Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
50	rs574671819	chr9:86535700-86535701	Active TSS Flanking Active TSS Weak transcription Enhancers	Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:74)

Disease	PMID	Source
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Medulloblastoma	21979893	CNVD
microdeletion syndrome	16199537	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Cancer	20164919	CNVD
Urothelial carcinoma	21177765	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
Melanoma	18172304	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	16751803	CNVD
Myelofibrosis	22110671	CNVD
lymphocytic leukemia	21291569	CNVD
Leukemia	17361228	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Glioblastoma	16823260	CNVD
Leukemia	18688285	CNVD
Non-small cell lung cancer	21044232	CNVD
Brain cancer	20823417	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Renal cell carcinoma	19461508	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Heart disease	21282601	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute myeloid leukemia	21251322	CNVD
Hepatocellular carcinoma	16750200	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Breast cancer	17603634	CNVD
Acute myeloid leukemia	20729466	CNVD
Oral cancer	21386901	CNVD
Glioblastoma multiforme	21750150	CNVD
Cancer	21183584	CNVD
Bipolar disorder	18458673	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Wilms tumour	21544195	CNVD
Prostate cancer	18632612	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Gastric cancer	17908304	CNVD
Urothelial cell carcinoma	18451213	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Renal cell carcinoma	18765545	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Glioblastoma multiforme	22286061	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:3277 , 50 per page) page: 1 2 3 4 5 6 7 ... 66

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:86461600-86535400	Weak transcription	Fetal Intestine Small	intestine
2	chr9:86461600-86535400	Weak transcription	Ovary	ovary
3	chr9:86462200-86535200	Weak transcription	Fetal Brain Female	brain
4	chr9:86462600-86535200	Weak transcription	Brain Anterior Caudate	brain
5	chr9:86481000-86535800	Weak transcription	Sigmoid Colon	Sigmoid Colon
6	chr9:86491000-86535200	Weak transcription	Duodenum Smooth Muscle	Duodenum
7	chr9:86491200-86535200	Weak transcription	Primary hematopoietic stem cells	blood
8	chr9:86496000-86535000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
9	chr9:86499400-86535000	Weak transcription	Fetal Kidney	kidney
10	chr9:86500000-86534800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
11	chr9:86500200-86535200	Weak transcription	Brain Inferior Temporal Lobe	brain
12	chr9:86500200-86535200	Weak transcription	Stomach Smooth Muscle	stomach
13	chr9:86500200-86535600	Weak transcription	Lung	lung
14	chr9:86502600-86535000	Weak transcription	Fetal Lung	lung
15	chr9:86506400-86534800	Weak transcription	Pancreas	Pancrea
16	chr9:86508200-86535600	Weak transcription	Esophagus	oesophagus
17	chr9:86512400-86535400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
18	chr9:86512600-86535400	Weak transcription	Placenta	Placenta
19	chr9:86513200-86534800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
20	chr9:86516200-86535000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
21	chr9:86517400-86535200	Weak transcription	Primary B cells from peripheral blood	blood
22	chr9:86517600-86535000	Weak transcription	Cortex derived primary cultured neurospheres	brain
23	chr9:86518800-86535000	Weak transcription	Primary B cells from cord blood	blood
24	chr9:86518800-86535000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
25	chr9:86518800-86535200	Weak transcription	Thymus	Thymus
26	chr9:86519000-86535000	Weak transcription	Fetal Muscle Leg	muscle
27	chr9:86519000-86535400	Weak transcription	Fetal Stomach	stomach
28	chr9:86520400-86535400	Weak transcription	Skeletal Muscle Female	skeletal muscle
29	chr9:86523800-86535000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
30	chr9:86523800-86535000	Weak transcription	Fetal Muscle Trunk	muscle
31	chr9:86525000-86535000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
32	chr9:86525600-86535000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
33	chr9:86525600-86535600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
34	chr9:86525600-86535600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
35	chr9:86526400-86535200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
36	chr9:86527200-86535000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
37	chr9:86528600-86535000	Weak transcription	Fetal Intestine Large	intestine
38	chr9:86531200-86535000	Weak transcription	NHEK	skin
39	chr9:86531600-86535200	Weak transcription	Osteobl	bone
40	chr9:86531600-86535400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
41	chr9:86531800-86535200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
42	chr9:86532200-86535200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
43	chr9:86532400-86534600	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
44	chr9:86532400-86535000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
45	chr9:86532400-86535000	Weak transcription	Hela-S3	cervix
46	chr9:86532400-86535200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
47	chr9:86532400-86535200	Weak transcription	Brain Hippocampus Middle	brain
48	chr9:86532600-86534800	Weak transcription	Primary T cells fromperipheralblood	blood
49	chr9:86532800-86535200	Weak transcription	H1 Cell Line	embryonic stem cell
50	chr9:86532800-86535400	Weak transcription	Psoas Muscle	Psoas

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