Variant report

Variant	nsv878783
Chromosome Location	chr4:28680520-28843029
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF1	chr4:28823833-28823988	K562	blood:	n/a	n/a
2	BCL11A	chr4:28684526-28684791	H1-hESC	embryonic stem cell:	n/a	n/a
3	BHLHE40	chr4:28789517-28789783	GM12878	blood:	n/a	n/a
4	CBX3	chr4:28688187-28688716	HCT-116	colon:	n/a	n/a
5	CEBPB	chr4:28777642-28778300	HepG2	liver:	n/a	chr4:28777661-28777672 chr4:28777821-28777830 chr4:28777784-28777795 chr4:28777821-28777830 chr4:28777819-28777832 chr4:28777784-28777793 chr4:28777821-28777830 chr4:28777820-28777831
6	CEBPB	chr4:28828128-28828442	HepG2	liver:	n/a	chr4:28828324-28828337 chr4:28828253-28828264
7	CEBPB	chr4:28711314-28711622	IMR90	lung:	n/a	n/a
8	CEBPB	chr4:28711290-28711826	Hela-S3	cervix:	n/a	n/a
9	CEBPB	chr4:28825718-28826010	IMR90	lung:	n/a	chr4:28825857-28825866 chr4:28825855-28825868 chr4:28825855-28825868 chr4:28825855-28825866 chr4:28825856-28825867
10	CEBPB	chr4:28707505-28707745	A549	lung:	n/a	n/a
11	CEBPB	chr4:28730328-28730676	MCF-7	breast:	n/a	n/a
12	CEBPB	chr4:28725882-28726242	HepG2	liver:	n/a	chr4:28726053-28726064 chr4:28725937-28725949
13	CEBPB	chr4:28777649-28777964	Hela-S3	cervix:	n/a	chr4:28777661-28777672 chr4:28777821-28777830 chr4:28777784-28777795 chr4:28777821-28777830 chr4:28777819-28777832 chr4:28777784-28777793 chr4:28777821-28777830 chr4:28777820-28777831
14	CEBPB	chr4:28777640-28777999	A549	lung:	n/a	chr4:28777661-28777672 chr4:28777821-28777830 chr4:28777784-28777795 chr4:28777821-28777830 chr4:28777819-28777832 chr4:28777784-28777793 chr4:28777821-28777830 chr4:28777820-28777831
15	CEBPB	chr4:28777624-28778013	IMR90	lung:	n/a	chr4:28777661-28777672 chr4:28777821-28777830 chr4:28777784-28777795 chr4:28777821-28777830 chr4:28777819-28777832 chr4:28777784-28777793 chr4:28777821-28777830 chr4:28777820-28777831
16	CEBPB	chr4:28725875-28726235	A549	lung:	n/a	chr4:28726053-28726064 chr4:28725937-28725949
17	CEBPB	chr4:28725866-28726227	K562	blood:	n/a	chr4:28726053-28726064 chr4:28725937-28725949
18	CEBPB	chr4:28746053-28746244	HepG2	liver:	n/a	chr4:28746141-28746152
19	CEBPB	chr4:28689104-28689305	IMR90	lung:	n/a	chr4:28689150-28689161
20	CEBPB	chr4:28777638-28778005	H1-hESC	embryonic stem cell:	n/a	chr4:28777661-28777672 chr4:28777821-28777830 chr4:28777784-28777795 chr4:28777821-28777830 chr4:28777819-28777832 chr4:28777784-28777793 chr4:28777821-28777830 chr4:28777820-28777831
21	CEBPB	chr4:28828136-28828421	IMR90	lung:	n/a	chr4:28828324-28828337 chr4:28828253-28828264
22	CEBPB	chr4:28725870-28726243	IMR90	lung:	n/a	chr4:28726053-28726064 chr4:28725937-28725949
23	CEBPB	chr4:28730461-28730602	H1-hESC	embryonic stem cell:	n/a	n/a
24	CEBPB	chr4:28689154-28689222	HepG2	liver:	n/a	n/a
25	CEBPB	chr4:28828214-28828396	K562	blood:	n/a	chr4:28828324-28828337 chr4:28828253-28828264
26	CEBPB	chr4:28725878-28726242	H1-hESC	embryonic stem cell:	n/a	chr4:28726053-28726064 chr4:28725937-28725949
27	CEBPB	chr4:28777638-28778001	K562	blood:	n/a	chr4:28777661-28777672 chr4:28777821-28777830 chr4:28777784-28777795 chr4:28777821-28777830 chr4:28777819-28777832 chr4:28777784-28777793 chr4:28777821-28777830 chr4:28777820-28777831
28	CEBPB	chr4:28725885-28726210	Hela-S3	cervix:	n/a	chr4:28726053-28726064 chr4:28725937-28725949
29	CEBPB	chr4:28730369-28730815	MCF-7	breast:	n/a	n/a
30	CEBPB	chr4:28825839-28825873	K562	blood:	n/a	chr4:28825857-28825866 chr4:28825855-28825868 chr4:28825855-28825868 chr4:28825855-28825866 chr4:28825856-28825867
31	CEBPB	chr4:28828127-28828387	A549	lung:	n/a	chr4:28828324-28828337 chr4:28828253-28828264
32	CEBPB	chr4:28721270-28721402	IMR90	lung:	n/a	n/a
33	CEBPB	chr4:28825761-28825987	A549	lung:	n/a	chr4:28825857-28825866 chr4:28825855-28825868 chr4:28825855-28825868 chr4:28825855-28825866 chr4:28825856-28825867
34	CEBPB	chr4:28711321-28711600	MCF-7	breast:	n/a	n/a
35	CEBPB	chr4:28825684-28826029	HepG2	liver:	n/a	chr4:28825857-28825866 chr4:28825855-28825868 chr4:28825855-28825868 chr4:28825855-28825866 chr4:28825856-28825867
36	CEBPB	chr4:28689052-28689245	H1-hESC	embryonic stem cell:	n/a	chr4:28689150-28689161
37	CHD2	chr4:28688298-28688477	H1-hESC	embryonic stem cell:	n/a	n/a
38	CHD2	chr4:28684477-28684861	H1-hESC	embryonic stem cell:	n/a	n/a
39	CTCF	chr4:28688380-28688530	HepG2	liver:	n/a	chr4:28688434-28688450 chr4:28688433-28688451 chr4:28688435-28688456 chr4:28688436-28688449
40	CTCF	chr4:28688360-28688510	NB4	blood:	n/a	chr4:28688434-28688450 chr4:28688433-28688451 chr4:28688435-28688456 chr4:28688436-28688449
41	CTCF	chr4:28688380-28688530	Hela-S3	cervix:	n/a	chr4:28688434-28688450 chr4:28688433-28688451 chr4:28688435-28688456 chr4:28688436-28688449
42	CTCF	chr4:28688400-28688550	HCT-116	colon:	n/a	chr4:28688434-28688450 chr4:28688433-28688451 chr4:28688435-28688456 chr4:28688436-28688449
43	CTCF	chr4:28790818-28790928	ProgFib	skin:	n/a	n/a
44	CTCF	chr4:28688380-28688530	GM12865	blood:	n/a	chr4:28688434-28688450 chr4:28688433-28688451 chr4:28688435-28688456 chr4:28688436-28688449
45	CTCF	chr4:28688380-28688530	GM12873	blood:	n/a	chr4:28688434-28688450 chr4:28688433-28688451 chr4:28688435-28688456 chr4:28688436-28688449
46	CTCF	chr4:28688360-28688510	Caco-2	colon:	n/a	chr4:28688434-28688450 chr4:28688433-28688451 chr4:28688435-28688456 chr4:28688436-28688449
47	CTCF	chr4:28790800-28790950	AG09309	skin:	n/a	n/a
48	CTCF	chr4:28688380-28688530	MCF-7	breast:	n/a	chr4:28688434-28688450 chr4:28688433-28688451 chr4:28688435-28688456 chr4:28688436-28688449
49	CTCF	chr4:28731988-28732212	IMR90	lung:	n/a	n/a
50	CTCF	chr4:28688340-28688490	GM12871	blood:	n/a	chr4:28688434-28688450 chr4:28688433-28688451 chr4:28688435-28688456 chr4:28688436-28688449

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr4:28725306-28725356	Jurkat	blood:	n/a
2	chr4:28725306-28725356	Jurkat	blood:	n/a
3	chr4:28829667-28829717	LNCaP	prostate:	n/a
4	chr4:28725306-28725356	HepG2	liver:	n/a
5	chr4:28829667-28829717	AG04450	lung:	fetal
6	chr4:28725306-28725356	AoSMC	blood vessel:	n/a
7	chr4:28829667-28829717	Hela-S3	cervix:	n/a
8	chr4:28725306-28725356	GM12878	blood:	n/a
9	chr4:28725306-28725356	BJ	skin:	n/a
10	chr4:28829667-28829717	ProgFib	skin:	n/a
11	chr4:28725306-28725356	AG09309	skin:	n/a
12	chr4:28725306-28725356	GM12891	blood:	n/a
13	chr4:28725306-28725356	ovcar-3	ovarian:	n/a
14	chr4:28829667-28829717	AoSMC	blood vessel:	n/a
15	chr4:28725306-28725356	ProgFib	skin:	n/a
16	chr4:28725306-28725356	CMK	blood:	n/a
17	chr4:28725306-28725356	NT2-D1	testis:	n/a
18	chr4:28725306-28725356	GM19239	blood:	n/a
19	chr4:28725306-28725356	GM12892	blood:	n/a
20	chr4:28725306-28725356	PFSK-1	brain:	n/a
21	chr4:28829667-28829717	HRE	kidney:	n/a
22	chr4:28725306-28725356	Hela-S3	cervix:	n/a
23	chr4:28829667-28829717	HRPEpiC	eye:	n/a
24	chr4:28829667-28829717	GM19239	blood:	n/a
25	chr4:28725306-28725356	PANC-1	pancreas:	n/a
26	chr4:28725306-28725356	SK-N-MC	brain:	n/a
27	chr4:28829667-28829717	GM06990	blood:	n/a
28	chr4:28725306-28725356	HCPEpiC	choroid plexus:	n/a
29	chr4:28725306-28725356	AG10803	skin:	n/a
30	chr4:28725306-28725356	Hepatocyte	liver:	n/a
31	chr4:28725306-28725356	T-47D	breast:	n/a
32	chr4:28725306-28725356	SK-N-SH_RA	brain:	n/a
33	chr4:28725306-28725356	HMEC	breast:	n/a
34	chr4:28725306-28725356	U87	brain:	n/a
35	chr4:28829667-28829717	MCF-7	breast:	n/a
36	chr4:28829667-28829717	IMR90	lung:	fetal
37	chr4:28829667-28829717	MCF10A-Er-Src	breast:	n/a
38	chr4:28829667-28829717	PFSK-1	brain:	n/a
39	chr4:28829667-28829717	BE2_C	brain:	n/a
40	chr4:28829667-28829717	AG09309	skin:	n/a
41	chr4:28725306-28725356	HUVEC	blood vessel:	n/a
42	chr4:28829667-28829717	HCF	heart:	n/a
43	chr4:28725306-28725356	SKMC	muscle:	n/a
44	chr4:28725306-28725356	HEK293	kidney:	embryo
45	chr4:28725306-28725356	HRE	kidney:	n/a
46	chr4:28725306-28725356	SK-N-SH	brain:	n/a
47	chr4:28725306-28725356	LNCaP	prostate:	n/a
48	chr4:28725306-28725356	NH-A	brain:	n/a
49	chr4:28829667-28829717	T-47D	breast:	n/a
50	chr4:28829667-28829717	SK-N-SH	brain:	n/a

No.	Distal block	Cell Line	Cell type
1	chr4:28712094..28713787-chr4:28714088..28715942,2	MCF-7	breast:
2	chr4:28699826..28702524-chr4:28704115..28706351,2	MCF-7	breast:
3	chr4:28760216..28762213-chr4:28762423..28765367,2	K562	blood:
4	chr4:28823073..28825418-chr4:28842573..28844204,2	MCF-7	breast:
5	chr4:28760216..28762213-chr4:28762423..28765367,2	K562	blood:
6	chr4:28756009..28757657-chr4:28759258..28762060,2	MCF-7	breast:
7	chr4:28690061..28692565-chr4:28693804..28695877,2	K562	blood:
8	chr17:45078439..45078999-chr4:28740495..28741046,2	MCF-7	breast:
9	chr4:28699826..28702524-chr4:28704115..28706351,2	MCF-7	breast:
10	chr4:28805670..28808284-chr4:28808958..28811325,2	K562	blood:
11	chr4:28464145..28465046-chr4:28688173..28688894,2	MCF-7	breast:
12	chr4:28787492..28790119-chr4:28809128..28811907,2	K562	blood:
13	chr4:28778617..28781313-chr4:28801513..28803129,2	K562	blood:
14	chr4:28756009..28757657-chr4:28759258..28762060,2	MCF-7	breast:
15	chr4:28797752..28800390-chr4:28800946..28802986,2	K562	blood:
16	chr4:28690061..28692565-chr4:28693804..28695877,2	K562	blood:
17	chr4:28683044..28685145-chr4:28691951..28693893,2	K562	blood:
18	chr4:28683044..28685145-chr4:28691951..28693893,2	K562	blood:
19	chr4:28823073..28825418-chr4:28842573..28844204,2	MCF-7	breast:
20	chr14:46737193..46737995-chr4:28770057..28770960,2	MCF-7	breast:
21	chr4:28797752..28800390-chr4:28800946..28802986,2	K562	blood:
22	chr4:28787492..28790119-chr4:28809128..28811907,2	K562	blood:
23	chr4:28805670..28808284-chr4:28808958..28811325,2	K562	blood:
24	chr4:28778617..28781313-chr4:28801513..28803129,2	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-STIM2-5	chr4:28754425-28754728	XLOC_003488
2	lnc-STIM2-8	chr4:28712820-28713094	NONHSAT095914
3	lnc-STIM2-5	chr4:28754781-28754905	XLOC_003488

miRNA name	Chromosome Location	mirBase accession
hsa-miR-4275	chr4:28821214-28821230	MIMAT0016905

Variant related genes	Relation type
RN7SL101P	TF binding region
MESTP3	TF binding region
RN7SL101P	CpG island
MESTP3	CpG island
ENSG00000243548	chromatin interactions
MTMR9	miRNA target sites

Extended variants
information (count: 2166 )
Associated
traits (count: 58 )

Variant overlapped rSNPs/rCNVs (count:2166 , 50 per page) page: 1 2 3 4 5 6 7 ... 44

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2047031	chr4:28680520-28680521	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs371007112	chr4:28680541-28680542	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs550892628	chr4:28680565-28680566	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs567509518	chr4:28680588-28680589	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs536021567	chr4:28680611-28680612	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs199713130	chr4:28680625-28680626	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs368672984	chr4:28680644-28680645	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs147641908	chr4:28680646-28680647	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs535100022	chr4:28680664-28680665	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs530445580	chr4:28680685-28680686	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs371684672	chr4:28680693-28680694	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs556911515	chr4:28680716-28680717	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs537387051	chr4:28680719-28680720	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs377090254	chr4:28680736-28680737	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs574179851	chr4:28680761-28680762	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs542824575	chr4:28680834-28680835	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs559414207	chr4:28680872-28680873	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs572886605	chr4:28680890-28680891	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs545066892	chr4:28680891-28680892	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs534126490	chr4:28680893-28680894	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs550480434	chr4:28680895-28680896	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs530511462	chr4:28680903-28680904	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs547691248	chr4:28680912-28680913	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs567500846	chr4:28680936-28680937	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs536023971	chr4:28680943-28680944	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs529924304	chr4:28680993-28680994	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs79116076	chr4:28681036-28681037	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs181517296	chr4:28681055-28681056	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs374452614	chr4:28681073-28681074	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs528622007	chr4:28681079-28681080	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs538253826	chr4:28681095-28681096	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs575738004	chr4:28681102-28681103	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs371298935	chr4:28681154-28681155	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs571315421	chr4:28681269-28681270	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs112651808	chr4:28681277-28681278	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs142229301	chr4:28681297-28681298	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs557252660	chr4:28681303-28681304	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs567828667	chr4:28681357-28681358	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs185770094	chr4:28681378-28681379	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs6840914	chr4:28681385-28681386	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
41	rs190094753	chr4:28681391-28681392	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs539034580	chr4:28681395-28681396	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs545165604	chr4:28681397-28681398	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs554314877	chr4:28681410-28681411	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs575317333	chr4:28681411-28681412	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs536359169	chr4:28681432-28681433	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs370646922	chr4:28681448-28681449	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs180897958	chr4:28681467-28681468	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs373308862	chr4:28681471-28681472	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs185932525	chr4:28681545-28681546	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:58)

Disease	PMID	Source
Chronic lymphocytic leukemia	21546498	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Colorectal cancer	19359472	CNVD
Neuroblastoma	17533364	CNVD
Oral squamous cell carcinoma	17134496	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Cancer	21637783	CNVD
Melanoma	21693616	CNVD
Squamous cell cancer	21044232	CNVD
Colorectal cancer	20709793	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Non-small cell lung cancer	21044232	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	17387387	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Cervical cancer	21062161	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Glioblastoma multiforme	21080181	CNVD
Chordoma	21602918	CNVD
HIV/AIDS	22032296	CNVD
Neuroblastoma	18923191	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Breast cancer	21785460	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Lung cancer	18438408	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	21858162	CNVD
small cell lung cancer	20016488	CNVD
Cancer	21183584	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Gastric cancer	21586687	CNVD
lymphocytic leukemia	21291569	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21829676	CNVD
Melanoma	22183965	CNVD
Multiple myeloma	17550852	CNVD
Prostate cancer	18632612	CNVD
Olfactory neuroblastoma	18408657	CNVD
Burkitt''s lymphoma	20823134	CNVD
Cancer	22183965	CNVD
Melanoma	18172304	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Prostate cancer	16573809	CNVD
Myelofibrosis	22110671	CNVD
Cancer	20164919	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Tetralogy of Fallot	22912587	CNVD

Chromatin state (count:164 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:28678800-28682000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr4:28680000-28681600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
3	chr4:28680000-28682600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr4:28680400-28681800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr4:28681600-28684400	Enhancers	HUES64 Cell Line	embryonic stem cell
6	chr4:28681600-28684400	Enhancers	iPS-18 Cell Line	embryonic stem cell
7	chr4:28681800-28684000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr4:28682000-28682800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
9	chr4:28682000-28682800	Enhancers	H9 Cell Line	embryonic stem cell
10	chr4:28682200-28682800	Enhancers	HUES6 Cell Line	embryonic stem cell
11	chr4:28682200-28684400	Enhancers	HUES48 Cell Line	embryonic stem cell
12	chr4:28682200-28685400	Enhancers	iPS-15b Cell Line	embryonic stem cell
13	chr4:28682400-28682800	Enhancers	iPS-20b Cell Line	embryonic stem cell
14	chr4:28682400-28684200	Enhancers	ES-I3 Cell Line	embryonic stem cell
15	chr4:28682600-28683200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
16	chr4:28682800-28683800	Weak transcription	HUES6 Cell Line	embryonic stem cell
17	chr4:28682800-28683800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
18	chr4:28682800-28684800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
19	chr4:28682800-28685200	Weak transcription	H9 Cell Line	embryonic stem cell
20	chr4:28683000-28683200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
21	chr4:28683200-28684400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
22	chr4:28683200-28685000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
23	chr4:28683800-28684200	Enhancers	HUES6 Cell Line	embryonic stem cell
24	chr4:28683800-28684200	Enhancers	iPS-20b Cell Line	embryonic stem cell
25	chr4:28684000-28684200	Enhancers	H1 Cell Line	embryonic stem cell
26	chr4:28684000-28684800	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
27	chr4:28684200-28684600	Flanking Active TSS	HUES6 Cell Line	embryonic stem cell
28	chr4:28684200-28684600	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell
29	chr4:28684200-28684800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
30	chr4:28684200-28685000	Weak transcription	H1 Cell Line	embryonic stem cell
31	chr4:28684400-28684600	Flanking Active TSS	HUES48 Cell Line	embryonic stem cell
32	chr4:28684400-28684600	Flanking Active TSS	HUES64 Cell Line	embryonic stem cell
33	chr4:28684400-28684800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
34	chr4:28684400-28685200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
35	chr4:28684400-28685400	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
36	chr4:28684400-28685400	Flanking Active TSS	iPS-18 Cell Line	embryonic stem cell
37	chr4:28684600-28684800	Enhancers	HUES48 Cell Line	embryonic stem cell
38	chr4:28684600-28684800	Enhancers	HUES6 Cell Line	embryonic stem cell
39	chr4:28684600-28684800	Enhancers	HUES64 Cell Line	embryonic stem cell
40	chr4:28684600-28685600	Enhancers	iPS-20b Cell Line	embryonic stem cell
41	chr4:28684800-28685000	Flanking Active TSS	HUES48 Cell Line	embryonic stem cell
42	chr4:28684800-28685000	Flanking Active TSS	HUES6 Cell Line	embryonic stem cell
43	chr4:28684800-28685000	Flanking Active TSS	HUES64 Cell Line	embryonic stem cell
44	chr4:28684800-28685400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
45	chr4:28684800-28686400	Enhancers	ES-I3 Cell Line	embryonic stem cell
46	chr4:28685000-28685200	Enhancers	HUES64 Cell Line	embryonic stem cell
47	chr4:28685000-28685400	Enhancers	H1 Cell Line	embryonic stem cell
48	chr4:28685000-28685400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
49	chr4:28685000-28685600	Enhancers	HUES48 Cell Line	embryonic stem cell
50	chr4:28685000-28685600	Enhancers	HUES6 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links