Variant report

Variant	nsv883386
Chromosome Location	chr6:1910108-2122454
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1468)
CpG islands
(count:733)
Chromatin interactive
region (count:76)
LncRNA
region (count:96)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1468 , 50 per page) page: 1 2 3 4 5 6 7 ... 30

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:2104544-2104926	HepG2	liver:	n/a	n/a
2	ARID3A	chr6:1982164-1982168	HepG2	liver:	n/a	n/a
3	ARID3A	chr6:2017245-2017425	HepG2	liver:	n/a	n/a
4	ARID3A	chr6:2054021-2054064	HepG2	liver:	n/a	n/a
5	ATF1	chr6:2063914-2064084	K562	blood:	n/a	n/a
6	ATF2	chr6:2110844-2112017	GM12878	blood:	n/a	n/a
7	ATF2	chr6:2081607-2082134	GM12878	blood:	n/a	n/a
8	ATF2	chr6:2111114-2112016	GM12878	blood:	n/a	n/a
9	ATF2	chr6:2079063-2079591	GM12878	blood:	n/a	n/a
10	ATF3	chr6:2111370-2111777	HCT-116	colon:	n/a	chr6:2111530-2111545 chr6:2111531-2111544
11	BATF	chr6:2111329-2111889	GM12878	blood:	n/a	chr6:2111639-2111650 chr6:2111531-2111544
12	BATF	chr6:1927285-1927683	GM12878	blood:	n/a	n/a
13	BATF	chr6:2111319-2111990	GM12878	blood:	n/a	chr6:2111639-2111650 chr6:2111531-2111544
14	BCL11A	chr6:2111331-2111731	GM12878	blood:	n/a	chr6:2111638-2111647 chr6:2111639-2111648 chr6:2111589-2111598
15	BCL11A	chr6:2111264-2111905	GM12878	blood:	n/a	chr6:2111638-2111647 chr6:2111639-2111648 chr6:2111589-2111598 chr6:2111822-2111831
16	BCL11A	chr6:2079176-2079524	GM12878	blood:	n/a	n/a
17	BCL3	chr6:1942004-1942404	GM12878	blood:	n/a	chr6:1942039-1942047
18	BCLAF1	chr6:2104414-2104922	GM12878	blood:	n/a	n/a
19	BCLAF1	chr6:2111435-2111937	GM12878	blood:	n/a	chr6:2111638-2111647 chr6:2111639-2111648 chr6:2111589-2111598 chr6:2111822-2111831
20	BHLHE40	chr6:2048167-2048485	HepG2	liver:	n/a	n/a
21	BHLHE40	chr6:2087299-2087385	GM12878	blood:	n/a	n/a
22	BHLHE40	chr6:2081674-2082026	GM12878	blood:	n/a	n/a
23	BHLHE40	chr6:2111337-2111790	GM12878	blood:	n/a	n/a
24	BHLHE40	chr6:2095378-2095459	K562	blood:	n/a	n/a
25	BHLHE40	chr6:1940816-1940864	GM12878	blood:	n/a	n/a
26	BHLHE40	chr6:2110839-2111080	GM12878	blood:	n/a	n/a
27	BRCA1	chr6:2072748-2073063	Hela-S3	cervix:	n/a	n/a
28	BRCA1	chr6:1952824-1953560	Hela-S3	cervix:	n/a	n/a
29	BRCA1	chr6:2026378-2026420	Hela-S3	cervix:	n/a	n/a
30	CBX3	chr6:1952791-1953456	HCT-116	colon:	n/a	n/a
31	CBX3	chr6:2111370-2111903	HCT-116	colon:	n/a	n/a
32	CEBPB	chr6:2021806-2022325	ECC-1	luminal epithelium:	n/a	chr6:2022120-2022131 chr6:2022119-2022132
33	CEBPB	chr6:1952949-1953457	Hela-S3	cervix:	n/a	n/a
34	CEBPB	chr6:2102582-2102921	A549	lung:	n/a	chr6:2102739-2102750
35	CEBPB	chr6:1945540-1945684	HepG2	liver:	n/a	n/a
36	CEBPB	chr6:1944955-1945134	Hela-S3	cervix:	n/a	chr6:1945071-1945082 chr6:1945072-1945083
37	CEBPB	chr6:1973240-1973440	H1-hESC	embryonic stem cell:	n/a	chr6:1973400-1973411 chr6:1973350-1973361
38	CEBPB	chr6:1929694-1929943	A549	lung:	n/a	chr6:1929769-1929780
39	CEBPB	chr6:2034538-2034900	HepG2	liver:	n/a	n/a
40	CEBPB	chr6:1949983-1950175	A549	lung:	n/a	chr6:1950099-1950110
41	CEBPB	chr6:1929672-1929953	HepG2	liver:	n/a	chr6:1929769-1929780
42	CEBPB	chr6:1949462-1950279	Hela-S3	cervix:	n/a	chr6:1949680-1949693 chr6:1949677-1949694 chr6:1950099-1950110 chr6:1950261-1950272
43	CEBPB	chr6:2048113-2048435	HepG2	liver:	n/a	chr6:2048259-2048270
44	CEBPB	chr6:1973235-1973539	IMR90	lung:	n/a	chr6:1973400-1973411 chr6:1973350-1973361
45	CEBPB	chr6:2034532-2034911	IMR90	lung:	n/a	n/a
46	CEBPB	chr6:2044762-2044922	HepG2	liver:	n/a	chr6:2044864-2044875
47	CEBPB	chr6:2102641-2102895	MCF-7	breast:	n/a	chr6:2102739-2102750
48	CEBPB	chr6:1940502-1941063	ECC-1	luminal epithelium:	n/a	chr6:1940506-1940519
49	CEBPB	chr6:2021876-2022339	ECC-1	luminal epithelium:	n/a	chr6:2022120-2022131 chr6:2022119-2022132
50	CEBPB	chr6:2102565-2102932	IMR90	lung:	n/a	chr6:2102739-2102750

(count:733 , 50 per page) page: 1 2 3 4 5 6 7 ... 15

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:1917931-1917981	HRE	kidney:	n/a
2	chr6:1917931-1917981	HRE	kidney:	n/a
3	chr6:2021942-2021992	LNCaP	prostate:	n/a
4	chr6:1994056-1994106	NB4	blood:	n/a
5	chr6:1930446-1930496	HAEpiC	amniotic membrane:	n/a
6	chr6:1970710-1970760	HPAEpiC	pulmonary alveolar:	n/a
7	chr6:2021942-2021992	NH-A	brain:	n/a
8	chr6:2063957-2064007	HRPEpiC	eye:	n/a
9	chr6:2030637-2030687	NB4	blood:	n/a
10	chr6:1994056-1994106	SK-N-SH	brain:	n/a
11	chr6:2110875-2110925	H1-hESC	embryonic stem cell:	embryo
12	chr6:1930446-1930496	HCM	heart:	n/a
13	chr6:2110875-2110925	CMK	blood:	n/a
14	chr6:1970710-1970760	HCT-116	colon:	n/a
15	chr6:2021942-2021992	NT2-D1	testis:	n/a
16	chr6:1970710-1970760	Caco-2	colon:	n/a
17	chr6:2063957-2064007	HepG2	liver:	n/a
18	chr6:2104322-2104372	AG09309	skin:	n/a
19	chr6:2063957-2064007	HL-60	blood:	n/a
20	chr6:1970710-1970760	BE2_C	brain:	n/a
21	chr6:1953086-1953136	K562	blood:	n/a
22	chr6:2030637-2030687	IMR90	lung:	fetal
23	chr6:2104322-2104372	HCT-116	colon:	n/a
24	chr6:1987269-1987319	HNPCEpiC	eye:	n/a
25	chr6:1917931-1917981	SKMC	muscle:	n/a
26	chr6:1987269-1987319	HPAEpiC	pulmonary alveolar:	n/a
27	chr6:2104322-2104372	HMEC	breast:	n/a
28	chr6:2104322-2104372	H1-hESC	embryonic stem cell:	embryo
29	chr6:2021942-2021992	AG04449	skin:	fetal
30	chr6:2110875-2110925	GM12891	blood:	n/a
31	chr6:2104322-2104372	AG10803	skin:	n/a
32	chr6:1930446-1930496	CMK	blood:	n/a
33	chr6:2104322-2104372	ProgFib	skin:	n/a
34	chr6:2030637-2030687	AoSMC	blood vessel:	n/a
35	chr6:2104322-2104372	HCM	heart:	n/a
36	chr6:1953086-1953136	GM19239	blood:	n/a
37	chr6:2110875-2110925	K562	blood:	n/a
38	chr6:1953086-1953136	NT2-D1	testis:	n/a
39	chr6:2001134-2001184	NB4	blood:	n/a
40	chr6:1987269-1987319	AG09319	gingival:	n/a
41	chr6:1917931-1917981	NH-A	brain:	n/a
42	chr6:2104322-2104372	SAEC	small airway:	n/a
43	chr6:1970710-1970760	GM12878	blood:	n/a
44	chr6:2001134-2001184	Hepatocyte	liver:	n/a
45	chr6:2110875-2110925	SK-N-SH	brain:	n/a
46	chr6:1994056-1994106	MCF-7	breast:	n/a
47	chr6:2104322-2104372	PANC-1	pancreas:	n/a
48	chr6:1970710-1970760	SK-N-MC	brain:	n/a
49	chr6:1987269-1987319	SAEC	small airway:	n/a
50	chr6:2110875-2110925	HAEpiC	amniotic membrane:	n/a

(count:76 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr6:2102993..2105699-chr6:2107973..2110016,2	K562	blood:
2	chr6:2053179..2055343-chr6:2055921..2058664,2	K562	blood:
3	chr6:1610117..1612459-chr6:2103517..2106482,4	MCF-7	breast:
4	chr6:1607895..1612984-chr6:2025307..2029705,5	MCF-7	breast:
5	chr6:1641287..1642175-chr6:1997946..1998735,3	MCF-7	breast:
6	chr6:1995618..1998504-chr6:2001883..2003856,2	MCF-7	breast:
7	chr6:1961516..1963757-chr6:1966305..1967942,2	MCF-7	breast:
8	chr6:1918511..1920955-chr6:1921418..1923384,2	K562	blood:
9	chr6:2119577..2122402-chr6:2352666..2355381,2	MCF-7	breast:
10	chr6:1610286..1612830-chr6:2028603..2030738,2	MCF-7	breast:
11	chr6:2009784..2011598-chr6:2035176..2037362,2	MCF-7	breast:
12	chr6:1964049..1966917-chr6:1973161..1976024,2	MCF-7	breast:
13	chr6:1964426..1965970-chr6:1968700..1971465,2	K562	blood:
14	chr6:1604456..1604957-chr6:2104229..2104835,2	MCF-7	breast:
15	chr6:1992439..1995123-chr6:2017322..2020251,2	MCF-7	breast:
16	chr6:2070854..2072589-chr6:2073721..2075447,2	K562	blood:
17	chr6:1607774..1610426-chr6:2098410..2101344,2	MCF-7	breast:
18	chr6:1964049..1966917-chr6:1973161..1976024,2	MCF-7	breast:
19	chr6:1596571..1597477-chr6:2104218..2105175,4	K562	blood:
20	chr6:1608029..1610545-chr6:1915416..1919377,4	MCF-7	breast:
21	chr6:2053179..2055343-chr6:2055921..2058664,2	K562	blood:
22	chr6:1609057..1611446-chr6:2026298..2028309,2	MCF-7	breast:
23	chr6:2005493..2008020-chr6:2019551..2022122,2	K562	blood:
24	chr6:1901619..1903388-chr6:1908460..1910593,2	MCF-7	breast:
25	chr6:2034659..2036744-chr6:2038441..2040012,2	K562	blood:
26	chr6:1604255..1605544-chr6:2104014..2105193,5	K562	blood:
27	chr6:2102993..2105699-chr6:2107973..2110016,2	K562	blood:
28	chr6:2030064..2032046-chr6:2035936..2037834,2	K562	blood:
29	chr6:2081922..2083588-chr6:2088961..2091628,2	MCF-7	breast:
30	chr6:1993624..1996051-chr6:2001806..2003962,2	MCF-7	breast:
31	chr6:1608030..1611197-chr6:2098990..2102744,3	MCF-7	breast:
32	chr6:1909308..1911195-chr6:1919277..1921722,2	K562	blood:
33	chr6:1940855..1943499-chr6:1944442..1946843,2	MCF-7	breast:
34	chr6:1604389..1605339-chr6:2037539..2038714,6	MCF-7	breast:
35	chr6:1909308..1911195-chr6:1919277..1921722,2	K562	blood:
36	chr6:1609450..1612431-chr6:1929248..1931252,2	MCF-7	breast:
37	chr6:2040794..2041414-chr6:2132566..2133423,2	MCF-7	breast:
38	chr6:1604328..1605242-chr6:2035866..2036724,2	MCF-7	breast:
39	chr6:1609035..1611562-chr6:2103045..2105968,3	MCF-7	breast:
40	chr6:2081922..2083588-chr6:2088961..2091628,2	MCF-7	breast:
41	chr6:1608425..1611671-chr6:2030333..2034108,4	MCF-7	breast:
42	chr6:1641666..1642175-chr6:1997946..1998735,2	MCF-7	breast:
43	chr6:1641339..1642209-chr6:2040485..2041381,10	MCF-7	breast:
44	chr6:2034659..2036744-chr6:2038441..2040012,2	K562	blood:
45	chr6:2107952..2110679-chr6:2111605..2113236,2	MCF-7	breast:
46	chr6:1961516..1963757-chr6:1966305..1967942,2	MCF-7	breast:
47	chr6:1612494..1615565-chr6:2103145..2107069,5	MCF-7	breast:
48	chr6:1996917..1999046-chr6:2003121..2005556,2	MCF-7	breast:
49	chr6:1940855..1943499-chr6:1944442..1946843,2	MCF-7	breast:
50	chr6:1948965..1951899-chr6:1951907..1953697,2	MCF-7	breast:

(count:96 , 50 per page) page: 1 2

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-FOXC1-10	chr6:1927516-1927576	NONHSAT106561
2	lnc-FOXC1-10	chr6:1943309-1943369	NONHSAT106568
3	lnc-FOXC1-10	chr6:1945952-1946031	NONHSAT106561
4	lnc-C6orf195-23	chr6:2022298-2022638	NONHSAT106586
5	lnc-FOXC1-11	chr6:1990010-1990055	NONHSAT106574
6	lnc-FOXC1-10	chr6:1943700-1943760	NONHSAT106568
7	lnc-FOXC1-10	chr6:1946124-1946878	NONHSAT106561
8	lnc-FOXC1-10	chr6:1926892-1927048	NONHSAT106561
9	lnc-FOXC1-12	chr6:2107466-2107557	NONHSAT106601
10	lnc-FOXC1-10	chr6:1940592-1940660	NONHSAT106561
11	lnc-FOXC1-10	chr6:1943485-1943576	NONHSAT106568
12	lnc-FOXC1-11	chr6:1993164-1994306	NONHSAT106576
13	lnc-FOXC1-10	chr6:1944178-1944279	NONHSAT106568
14	lnc-C6orf195-33	chr6:1933345-1933685	NONHSAT106563
15	lnc-FOXC1-11	chr6:1977962-1978063	NONHSAT106574
16	lnc-FOXC1-12	chr6:2120205-2120250	NONHSAT106600
17	lnc-FOXC1-12	chr6:2120363-2120431	NONHSAT106599
18	lnc-FOXC1-10	chr6:1928385-1928486	NONHSAT106561
19	lnc-FOXC1-10	chr6:1940434-1940479	NONHSAT106561
20	lnc-FOXC1-11	chr6:1990168-1990236	NONHSAT106574
21	lnc-FOXC1-11	chr6:1976469-1976625	NONHSAT106575
22	lnc-FOXC1-11	chr6:1977484-1977544	NONHSAT106575
23	lnc-FOXC1-12	chr6:2122004-2122075	NONHSAT106599
24	lnc-FOXC1-12	chr6:2120205-2120250	NONHSAT106599
25	lnc-FOXC1-10	chr6:1942233-1942304	NONHSAT106561
26	lnc-C6orf195-27	chr6:1972717-1973057	NONHSAT106573
27	lnc-FOXC1-11	chr6:1977269-1977360	NONHSAT106575
28	lnc-FOXC1-10	chr6:1958025-1958096	NONHSAT106568
29	lnc-FOXC1-12	chr6:2107862-2107975	NONHSAT106601
30	lnc-FOXC1-12	chr6:2106666-2106822	NONHSAT106600
31	lnc-FOXC1-11	chr6:1977093-1977153	NONHSAT106575
32	lnc-FOXC1-12	chr6:2106666-2106822	NONHSAT106601
33	lnc-FOXC1-10	chr6:1942685-1942841	NONHSAT106568
34	lnc-FOXC1-12	chr6:2107466-2107557	NONHSAT106599
35	lnc-FOXC1-11	chr6:1977269-1977360	NONHSAT106576
36	lnc-FOXC1-12	chr6:2106666-2106822	NONHSAT106599
37	lnc-C6orf195-32	chr6:1932480-1932713	NONHSAT106564
38	lnc-C6orf195-25	chr6:1988509-1988849	NONHSAT106582
39	lnc-FOXC1-10	chr6:1961744-1961823	NONHSAT106568
40	lnc-FOXC1-11	chr6:1992403-1992646	NONHSAT106576
41	lnc-FOXC1-12	chr6:2107290-2107350	NONHSAT106601
42	lnc-FOXC1-12	chr6:2107862-2107975	NONHSAT106600
43	lnc-C6orf195-33	chr6:1931750-1931983	NONHSAT106563
44	lnc-C6orf195-31	chr6:1948760-1949249	NONHSAT106569
45	lnc-FOXC1-11	chr6:1990010-1990055	NONHSAT106575
46	lnc-FOXC1-11	chr6:1977484-1977544	NONHSAT106576
47	lnc-C6orf195-27	chr6:1971122-1971355	NONHSAT106573
48	lnc-FOXC1-11	chr6:1991811-1991882	NONHSAT106575
49	lnc-FOXC1-11	chr6:1976469-1976625	NONHSAT106574
50	lnc-FOXC1-12	chr6:2107862-2107975	NONHSAT106599

No data

Variant related genes	Relation type
GMDS	TF binding region
GMDS	CpG island
ENSG00000112699	chromatin interactions
ENSG00000250903	chromatin interactions
ENSG00000054598	chromatin interactions

Extended variants
information (count: 8229 )
Associated
traits (count: 76 )

Variant overlapped rSNPs/rCNVs (count:8229 , 50 per page) page: 1 2 3 4 5 6 7 ... 165

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs10484693	chr6:1910108-1910109	Weak transcription Strong transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs17772389	chr6:1910172-1910173	Weak transcription Strong transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
3	rs369125726	chr6:1910173-1910174	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs116401946	chr6:1910224-1910225	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs576596606	chr6:1910229-1910230	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs186663354	chr6:1910257-1910258	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs537174134	chr6:1910261-1910262	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs528544784	chr6:1910267-1910268	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs189660971	chr6:1910291-1910292	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs146173759	chr6:1910299-1910300	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs551687440	chr6:1910338-1910339	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs536669784	chr6:1910349-1910350	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs553045868	chr6:1910357-1910358	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs371490895	chr6:1910492-1910493	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs9391939	chr6:1910494-1910495	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs397955319	chr6:1910507-1910508	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs66496705	chr6:1910549-1910550	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs534617333	chr6:1910557-1910558	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs186136972	chr6:1910561-1910562	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs542893850	chr6:1910569-1910570	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs73425523	chr6:1910603-1910604	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
22	rs377040420	chr6:1910630-1910631	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
23	rs190855475	chr6:1910632-1910633	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
24	rs139109105	chr6:1910637-1910638	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
25	rs4959160	chr6:1910716-1910717	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
26	rs35530178	chr6:1910719-1910720	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
27	rs528935794	chr6:1910747-1910748	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
28	rs183593670	chr6:1910771-1910772	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
29	rs561750777	chr6:1910824-1910825	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
30	rs372486910	chr6:1910828-1910829	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
31	rs559074713	chr6:1910865-1910866	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
32	rs144033470	chr6:1910868-1910869	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
33	rs145977496	chr6:1910892-1910893	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
34	rs571539356	chr6:1910908-1910909	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
35	rs537261518	chr6:1910940-1910941	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
36	rs76841216	chr6:1910979-1910980	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
37	rs571182450	chr6:1911008-1911009	Weak transcription Enhancers Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
38	rs3778549	chr6:1911025-1911026	Weak transcription Enhancers Active TSS Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
39	rs573253014	chr6:1911137-1911138	Weak transcription Enhancers Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
40	rs185929082	chr6:1911196-1911197	Weak transcription Enhancers Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
41	rs112304362	chr6:1911214-1911215	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
42	rs182899739	chr6:1911268-1911269	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
43	rs559906397	chr6:1911304-1911305	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
44	rs563301765	chr6:1911307-1911308	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
45	rs573723227	chr6:1911314-1911315	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
46	rs542351979	chr6:1911334-1911335	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
47	rs533518164	chr6:1911335-1911336	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
48	rs200281164	chr6:1911362-1911363	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
49	rs3778550	chr6:1911370-1911371	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
50	rs3778551	chr6:1911372-1911373	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a

Variant related diseases (count:76)

Disease	PMID	Source
Chronic lymphocytic leukemia	21546498	CNVD
Myelofibrosis	22110671	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Prader-willi syndrome	20588305	CNVD
Multiple myeloma	16616336	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Developmental delay	19490664	CNVD
Cancer	21183584	CNVD
Multiple Epiphyseal Dysplasia	20877625	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Glaucoma	18694899	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Prostate cancer	16573809	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Breast cancer	17603634	CNVD
Cancer	20164920	CNVD
Colorectal cancer	21297112	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Follicular lymphoma	20505157	CNVD
Glioblastoma multiforme	21080181	CNVD
Ewing''s sarcoma	21437220	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Leukemia	21518781	CNVD
Cancer	21637783	CNVD
Facial dysmorphism	22105932	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Bladder cancer	19088036	CNVD
Wilms tumour	21544195	CNVD
Uveal melanoma	21693616	CNVD
Biliary cancer	19435499	CNVD
Malaria	21533027	CNVD
Retinoblastoma	19183342	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Prostate cancer	18632612	CNVD
Myelodysplastic syndrome	21251322	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Breast cancer	21858162	CNVD
Breast cancer	21364760	CNVD
Lung cancer	18438408	CNVD
Bladder cancer	21909424	CNVD
Multiple myeloma	17550852	CNVD
Ewing''s sarcoma	17952124	CNVD
Cancer	20164919	CNVD
Gastric cancer	16891809	CNVD
Ovarian cancer	21781307	CNVD
small cell lung cancer	20016488	CNVD
Autism	22495311	CNVD
Autism	21448237	CNVD
Lung adenocarcinoma	21935476	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Non-small cell lung cancer	16651412	CNVD
Tetralogy of Fallot	22912587	CNVD
early-passage human iPS cells	21368824	CNVD
Gastric cancer	22315472	CNVD
Schizophrenia	23813976	CNVD

Chromatin state (count:1748 , 50 per page) page: 1 2 3 4 5 6 7 ... 35

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:1877600-1915200	Weak transcription	Primary T cells from cord blood	blood
2	chr6:1890600-1911400	Weak transcription	Primary hematopoietic stem cells	blood
3	chr6:1891800-1914800	Weak transcription	Colonic Mucosa	Colon
4	chr6:1895800-1910800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr6:1895800-1911200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr6:1896000-1916400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
7	chr6:1896400-1910800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr6:1897200-1916200	Weak transcription	Thymus	Thymus
9	chr6:1897400-1915000	Weak transcription	Esophagus	oesophagus
10	chr6:1897400-1915000	Weak transcription	Sigmoid Colon	Sigmoid Colon
11	chr6:1898600-1914800	Weak transcription	Gastric	stomach
12	chr6:1901600-1923400	Weak transcription	Rectal Mucosa Donor 29	rectum
13	chr6:1902200-1910800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
14	chr6:1902400-1910800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
15	chr6:1904000-1913000	Weak transcription	Dnd41	blood
16	chr6:1904200-1910800	Weak transcription	Psoas Muscle	Psoas
17	chr6:1904400-1912200	Weak transcription	Fetal Intestine Large	intestine
18	chr6:1905000-1910200	Strong transcription	HepG2	liver
19	chr6:1905000-1910800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
20	chr6:1905000-1910800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
21	chr6:1905000-1910800	Weak transcription	Aorta	Aorta
22	chr6:1905000-1911200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
23	chr6:1905000-1970600	Weak transcription	Spleen	Spleen
24	chr6:1905200-1915000	Weak transcription	Left Ventricle	heart
25	chr6:1905200-1917400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
26	chr6:1905200-1926000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
27	chr6:1905200-1926000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
28	chr6:1905400-1962000	Weak transcription	Pancreas	Pancrea
29	chr6:1905600-1914200	Weak transcription	Ovary	ovary
30	chr6:1906200-1910600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
31	chr6:1906200-1914800	Weak transcription	Fetal Intestine Small	intestine
32	chr6:1907200-1911200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
33	chr6:1907400-1914800	Weak transcription	Fetal Stomach	stomach
34	chr6:1908000-1915000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
35	chr6:1908000-1919800	Weak transcription	GM12878-XiMat	blood
36	chr6:1908200-1911200	Weak transcription	NHLF	lung
37	chr6:1908400-1910800	Weak transcription	Primary neutrophils fromperipheralblood	blood
38	chr6:1908400-1933600	Weak transcription	Liver	Liver
39	chr6:1908800-1910600	Enhancers	HUVEC	blood vessel
40	chr6:1908800-1911400	Weak transcription	Monocytes-CD14+_RO01746	blood
41	chr6:1908800-1911600	Enhancers	NH-A	brain
42	chr6:1909400-1910200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
43	chr6:1909400-1911200	Enhancers	Osteobl	bone
44	chr6:1909600-1910200	Strong transcription	Duodenum Mucosa	Duodenum
45	chr6:1909600-1910200	Strong transcription	Rectal Mucosa Donor 31	rectum
46	chr6:1909600-1910200	Strong transcription	Small Intestine	intestine
47	chr6:1909800-1926000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
48	chr6:1910000-1918000	Weak transcription	Lung	lung
49	chr6:1910200-1911200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
50	chr6:1910200-1914800	Weak transcription	Rectal Mucosa Donor 31	rectum

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