The 2.0 version of rSNPBase

Variant report

Variant rs528544784
Chromosome Location chr6:1910267-1910268
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:1877600-1915200 Weak transcription Primary T cells from cord blood blood
2 chr6:1890600-1911400 Weak transcription Primary hematopoietic stem cells blood
3 chr6:1891800-1914800 Weak transcription Colonic Mucosa Colon
4 chr6:1895800-1910800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr6:1895800-1911200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr6:1896000-1916400 Weak transcription Breast Myoepithelial Primary Cells Breast
7 chr6:1896400-1910800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr6:1897200-1916200 Weak transcription Thymus Thymus
9 chr6:1897400-1915000 Weak transcription Esophagus oesophagus
10 chr6:1897400-1915000 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr6:1898600-1914800 Weak transcription Gastric stomach
12 chr6:1901600-1923400 Weak transcription Rectal Mucosa Donor 29 rectum
13 chr6:1902200-1910800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
14 chr6:1902400-1910800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
15 chr6:1904000-1913000 Weak transcription Dnd41 blood
16 chr6:1904200-1910800 Weak transcription Psoas Muscle Psoas
17 chr6:1904400-1912200 Weak transcription Fetal Intestine Large intestine
18 chr6:1905000-1910800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr6:1905000-1910800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr6:1905000-1910800 Weak transcription Aorta Aorta
21 chr6:1905000-1911200 Weak transcription Primary hematopoietic stem cells short term culture blood
22 chr6:1905000-1970600 Weak transcription Spleen Spleen
23 chr6:1905200-1915000 Weak transcription Left Ventricle heart
24 chr6:1905200-1917400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr6:1905200-1926000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
26 chr6:1905200-1926000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
27 chr6:1905400-1962000 Weak transcription Pancreas Pancrea
28 chr6:1905600-1914200 Weak transcription Ovary ovary
29 chr6:1906200-1910600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr6:1906200-1914800 Weak transcription Fetal Intestine Small intestine
31 chr6:1907200-1911200 Weak transcription Fetal Adrenal Gland Adrenal Gland
32 chr6:1907400-1914800 Weak transcription Fetal Stomach stomach
33 chr6:1908000-1915000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
34 chr6:1908000-1919800 Weak transcription GM12878-XiMat blood
35 chr6:1908200-1911200 Weak transcription NHLF lung
36 chr6:1908400-1910800 Weak transcription Primary neutrophils fromperipheralblood blood
37 chr6:1908400-1933600 Weak transcription Liver Liver
38 chr6:1908800-1910600 Enhancers HUVEC blood vessel
39 chr6:1908800-1911400 Weak transcription Monocytes-CD14+_RO01746 blood
40 chr6:1908800-1911600 Enhancers NH-A brain
41 chr6:1909400-1911200 Enhancers Osteobl bone
42 chr6:1909800-1926000 Weak transcription iPS-15b Cell Line embryonic stem cell
43 chr6:1910000-1918000 Weak transcription Lung lung
44 chr6:1910200-1911200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr6:1910200-1914800 Weak transcription Rectal Mucosa Donor 31 rectum
46 chr6:1910200-1914800 Weak transcription HepG2 liver
47 chr6:1910200-1915000 Weak transcription Duodenum Mucosa Duodenum
48 chr6:1910200-1965800 Weak transcription Small Intestine intestine

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Last update: Aug 31, 2015