Variant report

Variant	nsv897784
Chromosome Location	chr11:66111901-66123043
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1103)
CpG islands
(count:1345)
Chromatin interactive
region (count:31)
LncRNA
region (count:5)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1103 , 50 per page) page: 1 2 3 4 5 6 7 ... 23

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr11:66115287-66115835	HepG2	liver:	n/a	n/a
2	ARID3A	chr11:66115373-66115790	K562	blood:	n/a	n/a
3	ARID3A	chr11:66112573-66112693	K562	blood:	n/a	n/a
4	ARID3A	chr11:66118432-66119091	HepG2	liver:	n/a	n/a
5	ATF1	chr11:66112091-66112831	K562	blood:	n/a	n/a
6	ATF2	chr11:66115268-66115934	GM12878	blood:	n/a	n/a
7	ATF2	chr11:66115321-66115830	H1-hESC	embryonic stem cell:	n/a	n/a
8	ATF2	chr11:66112363-66112811	GM12878	blood:	n/a	n/a
9	ATF2	chr11:66115280-66115835	H1-hESC	embryonic stem cell:	n/a	n/a
10	ATF2	chr11:66115292-66115773	GM12878	blood:	n/a	n/a
11	ATF2	chr11:66112307-66112746	H1-hESC	embryonic stem cell:	n/a	n/a
12	ATF2	chr11:66112357-66112727	GM12878	blood:	n/a	n/a
13	ATF3	chr11:66112415-66112747	K562	blood:	n/a	chr11:66112587-66112598
14	ATF3	chr11:66115248-66116069	HCT-116	colon:	n/a	chr11:66115330-66115339
15	ATF3	chr11:66112359-66112710	HepG2	liver:	n/a	chr11:66112587-66112598
16	ATF3	chr11:66115179-66116009	HCT-116	colon:	n/a	chr11:66115330-66115339
17	ATF3	chr11:66112366-66112843	A549	lung:	n/a	chr11:66112587-66112598
18	ATF3	chr11:66112435-66112712	H1-hESC	embryonic stem cell:	n/a	chr11:66112587-66112598
19	ATF3	chr11:66112380-66112796	K562	blood:	n/a	chr11:66112587-66112598
20	ATF3	chr11:66115293-66116024	K562	blood:	n/a	chr11:66115330-66115339
21	ATF3	chr11:66115119-66116194	A549	lung:	n/a	chr11:66115330-66115339
22	ATF3	chr11:66112472-66112687	GM12878	blood:	n/a	chr11:66112587-66112598
23	ATF3	chr11:66112201-66112838	GM12878	blood:	n/a	chr11:66112587-66112598
24	ATF3	chr11:66115185-66116079	A549	lung:	n/a	chr11:66115330-66115339
25	ATF3	chr11:66112325-66112906	A549	lung:	n/a	chr11:66112587-66112598
26	ATF3	chr11:66112419-66112886	H1-hESC	embryonic stem cell:	n/a	chr11:66112587-66112598
27	BACH1	chr11:66115373-66115923	H1-hESC	embryonic stem cell:	n/a	n/a
28	BACH1	chr11:66112424-66112748	H1-hESC	embryonic stem cell:	n/a	n/a
29	BACH1	chr11:66115472-66115725	K562	blood:	n/a	n/a
30	BACH1	chr11:66114795-66114964	H1-hESC	embryonic stem cell:	n/a	n/a
31	BACH1	chr11:66112430-66112669	K562	blood:	n/a	n/a
32	BATF	chr11:66115406-66115804	GM12878	blood:	n/a	n/a
33	BCL3	chr11:66112297-66112863	A549	lung:	n/a	chr11:66112714-66112723 chr11:66112319-66112332
34	BCL3	chr11:66115295-66115913	A549	lung:	n/a	chr11:66115324-66115337
35	BCL3	chr11:66114534-66115103	A549	lung:	n/a	n/a
36	BCL3	chr11:66115264-66115945	A549	lung:	n/a	chr11:66115324-66115337
37	BCLAF1	chr11:66115328-66115967	GM12878	blood:	n/a	n/a
38	BCLAF1	chr11:66115295-66115981	GM12878	blood:	n/a	chr11:66115324-66115337
39	BDP1	chr11:66115313-66115927	Hela-S3	cervix:	n/a	n/a
40	BDP1	chr11:66115330-66115774	K562	blood:	n/a	n/a
41	BHLHE40	chr11:66115338-66115859	GM12878	blood:	n/a	n/a
42	BHLHE40	chr11:66115443-66115871	K562	blood:	n/a	n/a
43	BHLHE40	chr11:66112219-66112796	K562	blood:	n/a	n/a
44	BHLHE40	chr11:66114857-66114987	K562	blood:	n/a	n/a
45	BRCA1	chr11:66115521-66115910	GM12878	blood:	n/a	n/a
46	BRCA1	chr11:66112417-66112746	H1-hESC	embryonic stem cell:	n/a	n/a
47	BRCA1	chr11:66114859-66114885	GM12878	blood:	n/a	n/a
48	BRCA1	chr11:66112335-66113229	Hela-S3	cervix:	n/a	n/a
49	BRCA1	chr11:66112433-66112783	HepG2	liver:	n/a	n/a
50	BRCA1	chr11:66112406-66112763	GM12878	blood:	n/a	n/a

(count:1345 , 50 per page) page: 1 2 3 4 5 6 7 ... 27

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:66114776-66114826	GM12891	blood:	n/a
2	chr11:66113995-66114045	PrEC	prostate:	n/a
3	chr11:66115419-66115469	RPTEC	kidney:	n/a
4	chr11:66114776-66114826	GM12891	blood:	n/a
5	chr11:66113995-66114045	PrEC	prostate:	n/a
6	chr11:66115419-66115469	RPTEC	kidney:	n/a
7	chr11:66113995-66114045	ProgFib	skin:	n/a
8	chr11:66112880-66112930	PANC-1	pancreas:	n/a
9	chr11:66112661-66112711	AG04450	lung:	fetal
10	chr11:66112762-66112812	HAEpiC	amniotic membrane:	n/a
11	chr11:66112762-66112812	H1-hESC	embryonic stem cell:	embryo
12	chr11:66112445-66112495	SK-N-MC	brain:	n/a
13	chr11:66118069-66118119	Caco-2	colon:	n/a
14	chr11:66112661-66112711	GM19239	blood:	n/a
15	chr11:66115419-66115469	U87	brain:	n/a
16	chr11:66111877-66111927	Hepatocyte	liver:	n/a
17	chr11:66112445-66112495	AG09309	skin:	n/a
18	chr11:66114071-66114121	H1-hESC	embryonic stem cell:	embryo
19	chr11:66115045-66115095	HEK293	kidney:	embryo
20	chr11:66114197-66114247	HPAEpiC	pulmonary alveolar:	n/a
21	chr11:66116455-66116505	HCF	heart:	n/a
22	chr11:66114071-66114121	PFSK-1	brain:	n/a
23	chr11:66114071-66114121	IMR90	lung:	fetal
24	chr11:66114776-66114826	MCF-7	breast:	n/a
25	chr11:66115647-66115697	A549	lung:	n/a
26	chr11:66112252-66112302	NB4	blood:	n/a
27	chr11:66118069-66118119	NB4	blood:	n/a
28	chr11:66112661-66112711	NHDF-neo	bronchial:	n/a
29	chr11:66112695-66112745	SK-N-MC	brain:	n/a
30	chr11:66113995-66114045	HL-60	blood:	n/a
31	chr11:66116455-66116505	Caco-2	colon:	n/a
32	chr11:66113666-66113716	AG04449	skin:	fetal
33	chr11:66114776-66114826	PrEC	prostate:	n/a
34	chr11:66112147-66112197	Hepatocyte	liver:	n/a
35	chr11:66114197-66114247	Hepatocyte	liver:	n/a
36	chr11:66116455-66116505	MCF-7	breast:	n/a
37	chr11:66111877-66111927	ovcar-3	ovarian:	n/a
38	chr11:66115647-66115697	U87	brain:	n/a
39	chr11:66115023-66115073	Jurkat	blood:	n/a
40	chr11:66114197-66114247	HRCEpiC	kidney:	n/a
41	chr11:66112252-66112302	T-47D	breast:	n/a
42	chr11:66112760-66112810	AG04449	skin:	fetal
43	chr11:66112445-66112495	IMR90	lung:	fetal
44	chr11:66113995-66114045	PANC-1	pancreas:	n/a
45	chr11:66112762-66112812	SK-N-MC	brain:	n/a
46	chr11:66112661-66112711	SK-N-SH	brain:	n/a
47	chr11:66114776-66114826	Caco-2	colon:	n/a
48	chr11:66115647-66115697	PFSK-1	brain:	n/a
49	chr11:66114776-66114826	GM12878	blood:	n/a
50	chr11:66115647-66115697	AG10803	skin:	n/a

(count:31 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr11:66122999..66125225-chr11:66125772..66127484,2	MCF-7	breast:
2	chr11:66115553..66117305-chr11:66118216..66119858,2	MCF-7	breast:
3	chr11:66055638..66057992-chr11:66113909..66116651,3	K562	blood:
4	chr11:66118889..66120535-chr11:66129008..66130899,2	K562	blood:
5	chr11:66084372..66086380-chr11:66109864..66112582,2	MCF-7	breast:
6	chr11:66077239..66082197-chr11:66111995..66115447,5	MCF-7	breast:
7	chr11:66111080..66113877-chr17:56707692..56710441,2	MCF-7	breast:
8	chr11:66055270..66057597-chr11:66112530..66115409,2	K562	blood:
9	chr11:66102163..66104427-chr11:66120567..66123134,2	MCF-7	breast:
10	chr11:66033236..66035909-chr11:66113505..66116691,3	K562	blood:
11	chr11:66118434..66120401-chr11:66124357..66127187,2	MCF-7	breast:
12	chr11:66078215..66080508-chr11:66113999..66115962,2	K562	blood:
13	chr11:66054499..66057435-chr11:66115136..66117035,2	MCF-7	breast:
14	chr11:66108839..66110813-chr11:66110934..66112585,3	K562	blood:
15	chr11:66111992..66114342-chr11:66382242..66384308,3	MCF-7	breast:
16	chr11:66115573..66117496-chr11:66118886..66121305,2	MCF-7	breast:
17	chr11:66108426..66118730-chr11:66133678..66141000,25	MCF-7	breast:
18	chr11:66115381..66116970-chr11:66233175..66235277,2	MCF-7	breast:
19	chr10:123687517..123688377-chr11:66114730..66115723,2	NB4	blood:
20	chr11:66112568..66115991-chr11:66232682..66235735,3	K562	blood:
21	chr11:66043530..66045792-chr11:66110035..66112602,2	MCF-7	breast:
22	chr11:66056831..66061115-chr11:66109718..66114909,6	MCF-7	breast:
23	chr11:66035609..66037495-chr11:66113505..66115336,2	MCF-7	breast:
24	chr11:65625352..65628744-chr11:66111177..66113723,3	K562	blood:
25	chr11:66077296..66081246-chr11:66109722..66112526,4	K562	blood:
26	chr11:65850193..65852902-chr11:66111593..66113196,2	MCF-7	breast:
27	chr11:66079011..66083261-chr11:66109999..66114385,7	MCF-7	breast:
28	chr11:66111442..66113639-chr11:66116948..66118481,2	K562	blood:
29	chr11:66103854..66118324-chr11:66119048..66141728,55	K562	blood:
30	chr11:66103854..66118324-chr11:66119048..66141728,55	K562	blood:
31	chr11:66033076..66035331-chr11:66114524..66116038,2	MCF-7	breast:

(count:5 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-RP11-867G23.8.1-2	chr11:66120926-66121090	NONHSAT022290
2	lnc-RP11-867G23.8.1-3	chr11:66116806-66116941	NONHSAT022292
3	lnc-RP11-867G23.8.1-2	chr11:66115421-66115541	NONHSAT022290
4	lnc-RP11-867G23.8.1-3	chr11:66115686-66115755	NONHSAT022292
5	lnc-RP11-867G23.8.1-3	chr11:66118668-66118845	NONHSAT022292

No data

Variant related genes	Relation type
B3GNT1	TF binding region
BRMS1	TF binding region
ENSG00000255468	TF binding region
B3GNT1	CpG island
BRMS1	CpG island
ENSG00000255468	CpG island
ENSG00000174669	chromatin interactions
ENSG00000226864	chromatin interactions
ENSG00000174871	chromatin interactions
ENSG00000174516	chromatin interactions
ENSG00000174807	chromatin interactions
ENSG00000174791	chromatin interactions
ENSG00000179292	chromatin interactions
ENSG00000248643	chromatin interactions
ENSG00000172757	chromatin interactions
ENSG00000174851	chromatin interactions
ENSG00000254855	chromatin interactions
ENSG00000254458	chromatin interactions
ENSG00000199325	chromatin interactions
ENSG00000174744	chromatin interactions
ENSG00000107669	chromatin interactions
ENSG00000212195	chromatin interactions
ENSG00000254762	chromatin interactions
ENSG00000174547	chromatin interactions
ENSG00000174684	chromatin interactions
ENSG00000172732	chromatin interactions
ENSG00000239306	chromatin interactions
ENSG00000255468	chromatin interactions
ENSG00000175115	chromatin interactions
ENSG00000254452	chromatin interactions
ENSG00000174903	chromatin interactions

Extended variants
information (count: 399 )
Associated
traits (count: 97 )

Variant overlapped rSNPs/rCNVs (count:399 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs35309950	chr11:66111901-66111902	Active TSS Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
2	rs144307646	chr11:66112105-66112106	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
3	rs376910494	chr11:66112171-66112172	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
4	rs186709797	chr11:66112198-66112199	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
5	rs147927946	chr11:66112203-66112204	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
6	rs192070651	chr11:66112289-66112290	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
7	rs375158368	chr11:66112323-66112324	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
8	rs115802446	chr11:66112334-66112335	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
9	rs141801787	chr11:66112337-66112338	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
10	rs550993752	chr11:66112341-66112342	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
11	rs571016432	chr11:66112375-66112376	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
12	rs143806749	chr11:66112454-66112455	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
13	rs553477096	chr11:66112484-66112485	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
14	rs11537992	chr11:66112510-66112511	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
15	rs2298467	chr11:66112512-66112513	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	16 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
16	rs535611200	chr11:66112513-66112514	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
17	rs373195934	chr11:66112528-66112529	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
18	rs377412180	chr11:66112529-66112530	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
19	rs577843275	chr11:66112533-66112534	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	17 gene(s)	Overlapped CNVs	n/a
20	rs370481448	chr11:66112534-66112535	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	17 gene(s)	Overlapped CNVs	n/a
21	rs543530108	chr11:66112554-66112555	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	17 gene(s)	Overlapped CNVs	n/a
22	rs374043296	chr11:66112555-66112556	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	17 gene(s)	Overlapped CNVs	n/a
23	rs564051642	chr11:66112561-66112562	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	17 gene(s)	Overlapped CNVs	n/a
24	rs1190624	chr11:66112574-66112575	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	19 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
25	rs540014884	chr11:66112668-66112669	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
26	rs559947536	chr11:66112686-66112687	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
27	rs528971926	chr11:66112705-66112706	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
28	rs548849359	chr11:66112729-66112730	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
29	rs182889043	chr11:66112742-66112743	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
30	rs531216142	chr11:66112747-66112748	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
31	rs551261190	chr11:66112797-66112798	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
32	rs571182492	chr11:66112833-66112834	Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
33	rs79642305	chr11:66112924-66112925	Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
34	rs186852695	chr11:66113026-66113027	Flanking Active TSS Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
35	rs567111399	chr11:66113046-66113047	Flanking Active TSS Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
36	rs191735108	chr11:66113057-66113058	Flanking Active TSS Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
37	rs555584686	chr11:66113064-66113065	Flanking Active TSS Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
38	rs145270731	chr11:66113153-66113154	Flanking Active TSS Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
39	rs182104341	chr11:66113198-66113199	Flanking Active TSS Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
40	rs537869583	chr11:66113231-66113232	Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
41	rs557755436	chr11:66113264-66113265	Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
42	rs141108052	chr11:66113327-66113328	Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
43	rs540174173	chr11:66113337-66113338	Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
44	rs117338501	chr11:66113457-66113458	Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
45	rs573756401	chr11:66113473-66113474	Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
46	rs150186478	chr11:66113516-66113517	Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
47	rs1044139	chr11:66113517-66113518	Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
48	rs562459083	chr11:66113528-66113529	Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
49	rs397509396	chr11:66113551-66113552	Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
50	rs201906152	chr11:66113589-66113590	Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:97)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Gastric cancer	17908304	CNVD
Multiple myeloma	20724749	CNVD
Wilms tumour	21544195	CNVD
Autism	22495311	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Glioblastoma multiforme	21138945	CNVD
Acute myeloid leukemia	20729466	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	21637783	CNVD
Acute myeloid leukemia	16864856	CNVD
Chronic lymphocytic leukemia	21795749	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	21484798	CNVD
Ewing''s sarcoma	21437220	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	20837533	CNVD
Breast cancer	21264507	CNVD
Cervical cancer	21063398	CNVD
Glioblastoma multiforme	19960244	CNVD
Liposarcoma	21253554	CNVD
Neuroblastoma	18923524	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Neuroblastoma	17533364	CNVD
Breast cancer	21364760	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Prostate cancer	18632612	CNVD
Glioblastoma multiforme	21080181	CNVD
Smith-Lemli-Opitz syndrome	21572526	CNVD
Multiple myeloma	16461302	CNVD
Cancer	16751803	CNVD
Seminomas	18059402	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Metanephric adenoma	20802469	CNVD
Chordoma	21602918	CNVD
Melanoma	18172304	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
ovarian endometriomas	16273235	CNVD
Breast cancer	16417655	CNVD
Myelofibrosis	22110671	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Prostate cancer	17217626	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Breast cancer	21045282	CNVD
Breast cancer	21806811	CNVD
Breast cancer	22002566	CNVD
Ductal carcinoma	18381933	CNVD
Retinoblastoma	22278416	CNVD
Breast cancer	20953835	CNVD
oto-dental syndrome	17656375	CNVD
Asthma	21956041	CNVD
Breast cancer	17603634	CNVD
Ovarian neoplasms	16753589	CNVD
Non-small cell lung cancer	20864512	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cervical cancer	21062161	CNVD
Breast cancer	21509527	CNVD
Anaplastic thyroid cancer	18753363	CNVD
Breast cancer	17001317	CNVD
Oral squamous cell carcinoma	16619035	CNVD
Intracranial aneurysm	16715129	CNVD
Colorectal cancer	16272173	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Colorectal cancer	16882699	CNVD
Berardinelli-seip congenital generalized lipodystrophy	17668395	CNVD
Spinal muscular atrophy	17668395	CNVD
Neonatal seizures	17668395	CNVD
Neonatal seizures	17668391	CNVD
Neuroticism	17667963	CNVD
Cancer	17916600	CNVD
Squamous cell cancer	19047905	CNVD
Multiple endocrine neoplasia type 1	19566914	CNVD
XY sex reversal	17503084	CNVD
Berardinelli-seip congenital generalized lipodystrophy	17668391	CNVD
Maculopathy	17646752	CNVD
Breast cancer	17899364	CNVD
Breast cancer	17157792	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Hodgkin''s lymphoma	17606441	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Cancer	20164919	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Melanoma	20877625	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:1001 , 50 per page) page: 1 2 3 4 5 6 7 ... 21

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:66111000-66112000	Flanking Active TSS	NHEK	skin
2	chr11:66111200-66112000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr11:66111200-66112000	Flanking Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
4	chr11:66111200-66112000	Enhancers	Spleen	Spleen
5	chr11:66111200-66112200	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr11:66111200-66112200	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr11:66111200-66112200	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
8	chr11:66111200-66112200	Flanking Active TSS	Duodenum Mucosa	Duodenum
9	chr11:66111200-66112200	Flanking Active TSS	Hela-S3	cervix
10	chr11:66111200-66112400	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
11	chr11:66111200-66112400	Flanking Active TSS	Colonic Mucosa	Colon
12	chr11:66111200-66113000	Active TSS	HUES64 Cell Line	embryonic stem cell
13	chr11:66111200-66115000	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
14	chr11:66111400-66112000	Flanking Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr11:66111400-66112000	Flanking Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
16	chr11:66111400-66112000	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
17	chr11:66111400-66112000	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
18	chr11:66111400-66112000	Flanking Active TSS	Brain Hippocampus Middle	brain
19	chr11:66111400-66112000	Flanking Active TSS	GM12878-XiMat	blood
20	chr11:66111400-66112000	Flanking Active TSS	HMEC	breast
21	chr11:66111400-66112000	Flanking Active TSS	K562	blood
22	chr11:66111400-66112200	Flanking Active TSS	Primary T cells from cord blood	blood
23	chr11:66111400-66112200	Flanking Active TSS	Rectal Mucosa Donor 31	rectum
24	chr11:66111400-66112200	Flanking Active TSS	Dnd41	blood
25	chr11:66111400-66112400	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
26	chr11:66111400-66112400	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
27	chr11:66111400-66112600	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
28	chr11:66111400-66113000	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
29	chr11:66111400-66113000	Active TSS	A549	lung
30	chr11:66111400-66113000	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
31	chr11:66111400-66113200	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
32	chr11:66111600-66112000	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
33	chr11:66111600-66112000	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
34	chr11:66111600-66112000	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--
35	chr11:66111600-66112000	Flanking Active TSS	Muscle Satellite Cultured Cells	--
36	chr11:66111600-66112000	Flanking Active TSS	Colon Smooth Muscle	Colon
37	chr11:66111600-66112000	Flanking Active TSS	Fetal Intestine Small	intestine
38	chr11:66111600-66112000	Flanking Active TSS	Fetal Kidney	kidney
39	chr11:66111600-66112000	Flanking Active TSS	HSMMtube	muscle
40	chr11:66111600-66112000	Flanking Active TSS	NHDF-Ad	bronchial
41	chr11:66111600-66112200	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell
42	chr11:66111600-66112200	Flanking Active TSS	Breast Myoepithelial Primary Cells	Breast
43	chr11:66111600-66112200	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
44	chr11:66111600-66112200	Flanking Active TSS	Primary T helper memory cells from peripheral blood 2	blood
45	chr11:66111600-66112200	Flanking Active TSS	Primary T helper naive cells from peripheral blood	blood
46	chr11:66111600-66112200	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
47	chr11:66111600-66112200	Flanking Active TSS	Primary T killer memory cells from peripheral blood	blood
48	chr11:66111600-66112200	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
49	chr11:66111600-66112200	Flanking Active TSS	Brain Anterior Caudate	brain
50	chr11:66111600-66112200	Flanking Active TSS	Brain Inferior Temporal Lobe	brain

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