Variant report

Variant	nsv897785
Chromosome Location	chr11:66112574-66123043
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1043)
CpG islands
(count:1098)
Chromatin interactive
region (count:30)
LncRNA
region (count:5)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1043 , 50 per page) page: 1 2 3 4 5 6 7 ... 21

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr11:66118432-66119091	HepG2	liver:	n/a	n/a
2	ARID3A	chr11:66115373-66115790	K562	blood:	n/a	n/a
3	ARID3A	chr11:66112573-66112693	K562	blood:	n/a	n/a
4	ARID3A	chr11:66115287-66115835	HepG2	liver:	n/a	n/a
5	ATF1	chr11:66112091-66112831	K562	blood:	n/a	n/a
6	ATF2	chr11:66112363-66112811	GM12878	blood:	n/a	n/a
7	ATF2	chr11:66115280-66115835	H1-hESC	embryonic stem cell:	n/a	n/a
8	ATF2	chr11:66112307-66112746	H1-hESC	embryonic stem cell:	n/a	n/a
9	ATF2	chr11:66115292-66115773	GM12878	blood:	n/a	n/a
10	ATF2	chr11:66115321-66115830	H1-hESC	embryonic stem cell:	n/a	n/a
11	ATF2	chr11:66115268-66115934	GM12878	blood:	n/a	n/a
12	ATF2	chr11:66112357-66112727	GM12878	blood:	n/a	n/a
13	ATF3	chr11:66115293-66116024	K562	blood:	n/a	chr11:66115330-66115339
14	ATF3	chr11:66112366-66112843	A549	lung:	n/a	chr11:66112587-66112598
15	ATF3	chr11:66112415-66112747	K562	blood:	n/a	chr11:66112587-66112598
16	ATF3	chr11:66112201-66112838	GM12878	blood:	n/a	chr11:66112587-66112598
17	ATF3	chr11:66115179-66116009	HCT-116	colon:	n/a	chr11:66115330-66115339
18	ATF3	chr11:66115248-66116069	HCT-116	colon:	n/a	chr11:66115330-66115339
19	ATF3	chr11:66112359-66112710	HepG2	liver:	n/a	chr11:66112587-66112598
20	ATF3	chr11:66112380-66112796	K562	blood:	n/a	chr11:66112587-66112598
21	ATF3	chr11:66112325-66112906	A549	lung:	n/a	chr11:66112587-66112598
22	ATF3	chr11:66115185-66116079	A549	lung:	n/a	chr11:66115330-66115339
23	ATF3	chr11:66115119-66116194	A549	lung:	n/a	chr11:66115330-66115339
24	ATF3	chr11:66112472-66112687	GM12878	blood:	n/a	chr11:66112587-66112598
25	ATF3	chr11:66112435-66112712	H1-hESC	embryonic stem cell:	n/a	chr11:66112587-66112598
26	ATF3	chr11:66112419-66112886	H1-hESC	embryonic stem cell:	n/a	chr11:66112587-66112598
27	BACH1	chr11:66115373-66115923	H1-hESC	embryonic stem cell:	n/a	n/a
28	BACH1	chr11:66112430-66112669	K562	blood:	n/a	n/a
29	BACH1	chr11:66112424-66112748	H1-hESC	embryonic stem cell:	n/a	n/a
30	BACH1	chr11:66115472-66115725	K562	blood:	n/a	n/a
31	BACH1	chr11:66114795-66114964	H1-hESC	embryonic stem cell:	n/a	n/a
32	BATF	chr11:66115406-66115804	GM12878	blood:	n/a	n/a
33	BCL3	chr11:66115264-66115945	A549	lung:	n/a	chr11:66115324-66115337
34	BCL3	chr11:66114534-66115103	A549	lung:	n/a	n/a
35	BCL3	chr11:66115295-66115913	A549	lung:	n/a	chr11:66115324-66115337
36	BCL3	chr11:66112297-66112863	A549	lung:	n/a	chr11:66112714-66112723 chr11:66112319-66112332
37	BCLAF1	chr11:66115295-66115981	GM12878	blood:	n/a	chr11:66115324-66115337
38	BCLAF1	chr11:66115328-66115967	GM12878	blood:	n/a	n/a
39	BDP1	chr11:66115330-66115774	K562	blood:	n/a	n/a
40	BDP1	chr11:66115313-66115927	Hela-S3	cervix:	n/a	n/a
41	BHLHE40	chr11:66115443-66115871	K562	blood:	n/a	n/a
42	BHLHE40	chr11:66114857-66114987	K562	blood:	n/a	n/a
43	BHLHE40	chr11:66112219-66112796	K562	blood:	n/a	n/a
44	BHLHE40	chr11:66115338-66115859	GM12878	blood:	n/a	n/a
45	BRCA1	chr11:66112433-66112783	HepG2	liver:	n/a	n/a
46	BRCA1	chr11:66112406-66112763	GM12878	blood:	n/a	n/a
47	BRCA1	chr11:66115390-66115855	Hela-S3	cervix:	n/a	n/a
48	BRCA1	chr11:66112417-66112746	H1-hESC	embryonic stem cell:	n/a	n/a
49	BRCA1	chr11:66115521-66115910	GM12878	blood:	n/a	n/a
50	BRCA1	chr11:66115444-66115765	HepG2	liver:	n/a	n/a

(count:1098 , 50 per page) page: 1 2 3 4 5 6 7 ... 22

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:66113995-66114045	AG04450	lung:	fetal
2	chr11:66115419-66115469	T-47D	breast:	n/a
3	chr11:66115419-66115469	HCT-116	colon:	n/a
4	chr11:66115023-66115073	Hepatocyte	liver:	n/a
5	chr11:66118069-66118119	AG09319	gingival:	n/a
6	chr11:66114197-66114247	SK-N-MC	brain:	n/a
7	chr11:66113995-66114045	ovcar-3	ovarian:	n/a
8	chr11:66115023-66115073	T-47D	breast:	n/a
9	chr11:66116455-66116505	Caco-2	colon:	n/a
10	chr11:66114071-66114121	HIPEpiC	eye:	n/a
11	chr11:66116455-66116505	NB4	blood:	n/a
12	chr11:66115045-66115095	NHDF-neo	bronchial:	n/a
13	chr11:66116455-66116505	PANC-1	pancreas:	n/a
14	chr11:66116455-66116505	CMK	blood:	n/a
15	chr11:66115023-66115073	AG09309	skin:	n/a
16	chr11:66115647-66115697	HCF	heart:	n/a
17	chr11:66113666-66113716	PrEC	prostate:	n/a
18	chr11:66115647-66115697	AoSMC	blood vessel:	n/a
19	chr11:66114197-66114247	ProgFib	skin:	n/a
20	chr11:66112880-66112930	T-47D	breast:	n/a
21	chr11:66112762-66112812	HPAEpiC	pulmonary alveolar:	n/a
22	chr11:66112880-66112930	SKMC	muscle:	n/a
23	chr11:66114071-66114121	Hela-S3	cervix:	n/a
24	chr11:66113666-66113716	RPTEC	kidney:	n/a
25	chr11:66112661-66112711	AG10803	skin:	n/a
26	chr11:66115023-66115073	HNPCEpiC	eye:	n/a
27	chr11:66112661-66112711	PrEC	prostate:	n/a
28	chr11:66112666-66112716	HCPEpiC	choroid plexus:	n/a
29	chr11:66112880-66112930	AG09309	skin:	n/a
30	chr11:66115419-66115469	HL-60	blood:	n/a
31	chr11:66115023-66115073	SAEC	small airway:	n/a
32	chr11:66112659-66112709	Hepatocyte	liver:	n/a
33	chr11:66115023-66115073	HRE	kidney:	n/a
34	chr11:66113666-66113716	Caco-2	colon:	n/a
35	chr11:66116455-66116505	RPTEC	kidney:	n/a
36	chr11:66114197-66114247	NH-A	brain:	n/a
37	chr11:66115045-66115095	HCT-116	colon:	n/a
38	chr11:66113995-66114045	HUVEC	blood vessel:	n/a
39	chr11:66114776-66114826	HCM	heart:	n/a
40	chr11:66112760-66112810	Jurkat	blood:	n/a
41	chr11:66115023-66115073	NH-A	brain:	n/a
42	chr11:66112762-66112812	ECC-1	luminal epithelium:	n/a
43	chr11:66113666-66113716	AG09319	gingival:	n/a
44	chr11:66115023-66115073	AoSMC	blood vessel:	n/a
45	chr11:66115419-66115469	GM06990	blood:	n/a
46	chr11:66112880-66112930	GM12891	blood:	n/a
47	chr11:66113995-66114045	AG09319	gingival:	n/a
48	chr11:66112659-66112709	ProgFib	skin:	n/a
49	chr11:66118069-66118119	HL-60	blood:	n/a
50	chr11:66114071-66114121	AG10803	skin:	n/a

(count:30 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr11:66115553..66117305-chr11:66118216..66119858,2	MCF-7	breast:
2	chr11:66115381..66116970-chr11:66233175..66235277,2	MCF-7	breast:
3	chr11:66108426..66118730-chr11:66133678..66141000,25	MCF-7	breast:
4	chr11:66108839..66110813-chr11:66110934..66112585,3	K562	blood:
5	chr11:66054499..66057435-chr11:66115136..66117035,2	MCF-7	breast:
6	chr11:66103854..66118324-chr11:66119048..66141728,55	K562	blood:
7	chr11:66043530..66045792-chr11:66110035..66112602,2	MCF-7	breast:
8	chr11:66033076..66035331-chr11:66114524..66116038,2	MCF-7	breast:
9	chr11:66118434..66120401-chr11:66124357..66127187,2	MCF-7	breast:
10	chr11:66112568..66115991-chr11:66232682..66235735,3	K562	blood:
11	chr11:66111080..66113877-chr17:56707692..56710441,2	MCF-7	breast:
12	chr11:65625352..65628744-chr11:66111177..66113723,3	K562	blood:
13	chr11:65850193..65852902-chr11:66111593..66113196,2	MCF-7	breast:
14	chr11:66111992..66114342-chr11:66382242..66384308,3	MCF-7	breast:
15	chr11:66035609..66037495-chr11:66113505..66115336,2	MCF-7	breast:
16	chr11:66111442..66113639-chr11:66116948..66118481,2	K562	blood:
17	chr11:66055270..66057597-chr11:66112530..66115409,2	K562	blood:
18	chr11:66055638..66057992-chr11:66113909..66116651,3	K562	blood:
19	chr11:66118889..66120535-chr11:66129008..66130899,2	K562	blood:
20	chr10:123687517..123688377-chr11:66114730..66115723,2	NB4	blood:
21	chr11:66033236..66035909-chr11:66113505..66116691,3	K562	blood:
22	chr11:66056831..66061115-chr11:66109718..66114909,6	MCF-7	breast:
23	chr11:66077239..66082197-chr11:66111995..66115447,5	MCF-7	breast:
24	chr11:66115573..66117496-chr11:66118886..66121305,2	MCF-7	breast:
25	chr11:66122999..66125225-chr11:66125772..66127484,2	MCF-7	breast:
26	chr11:66102163..66104427-chr11:66120567..66123134,2	MCF-7	breast:
27	chr11:66084372..66086380-chr11:66109864..66112582,2	MCF-7	breast:
28	chr11:66078215..66080508-chr11:66113999..66115962,2	K562	blood:
29	chr11:66103854..66118324-chr11:66119048..66141728,55	K562	blood:
30	chr11:66079011..66083261-chr11:66109999..66114385,7	MCF-7	breast:

(count:5 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-RP11-867G23.8.1-3	chr11:66118668-66118845	NONHSAT022292
2	lnc-RP11-867G23.8.1-2	chr11:66115421-66115541	NONHSAT022290
3	lnc-RP11-867G23.8.1-3	chr11:66116806-66116941	NONHSAT022292
4	lnc-RP11-867G23.8.1-3	chr11:66115686-66115755	NONHSAT022292
5	lnc-RP11-867G23.8.1-2	chr11:66120926-66121090	NONHSAT022290

No data

Variant related genes	Relation type
B3GNT1	TF binding region
BRMS1	TF binding region
ENSG00000255468	TF binding region
B3GNT1	CpG island
BRMS1	CpG island
ENSG00000255468	CpG island
ENSG00000254458	chromatin interactions
ENSG00000248643	chromatin interactions
ENSG00000174744	chromatin interactions
ENSG00000226864	chromatin interactions
ENSG00000174807	chromatin interactions
ENSG00000255468	chromatin interactions
ENSG00000212195	chromatin interactions
ENSG00000239306	chromatin interactions
ENSG00000199325	chromatin interactions
ENSG00000174669	chromatin interactions
ENSG00000174684	chromatin interactions
ENSG00000174871	chromatin interactions
ENSG00000174791	chromatin interactions
ENSG00000254762	chromatin interactions
ENSG00000172732	chromatin interactions
ENSG00000174516	chromatin interactions
ENSG00000254452	chromatin interactions
ENSG00000254855	chromatin interactions
ENSG00000174903	chromatin interactions
ENSG00000179292	chromatin interactions
ENSG00000174547	chromatin interactions
ENSG00000172757	chromatin interactions
ENSG00000174851	chromatin interactions
ENSG00000175115	chromatin interactions
ENSG00000107669	chromatin interactions

Extended variants
information (count: 376 )
Associated
traits (count: 97 )

Variant overlapped rSNPs/rCNVs (count:376 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs1190624	chr11:66112574-66112575	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region	19 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs540014884	chr11:66112668-66112669	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
3	rs559947536	chr11:66112686-66112687	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
4	rs528971926	chr11:66112705-66112706	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
5	rs548849359	chr11:66112729-66112730	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
6	rs182889043	chr11:66112742-66112743	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
7	rs531216142	chr11:66112747-66112748	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
8	rs551261190	chr11:66112797-66112798	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
9	rs571182492	chr11:66112833-66112834	Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
10	rs79642305	chr11:66112924-66112925	Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
11	rs186852695	chr11:66113026-66113027	Flanking Active TSS Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
12	rs567111399	chr11:66113046-66113047	Flanking Active TSS Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
13	rs191735108	chr11:66113057-66113058	Flanking Active TSS Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
14	rs555584686	chr11:66113064-66113065	Flanking Active TSS Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
15	rs145270731	chr11:66113153-66113154	Flanking Active TSS Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
16	rs182104341	chr11:66113198-66113199	Flanking Active TSS Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
17	rs537869583	chr11:66113231-66113232	Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
18	rs557755436	chr11:66113264-66113265	Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
19	rs141108052	chr11:66113327-66113328	Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
20	rs540174173	chr11:66113337-66113338	Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
21	rs117338501	chr11:66113457-66113458	Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
22	rs573756401	chr11:66113473-66113474	Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
23	rs150186478	chr11:66113516-66113517	Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
24	rs1044139	chr11:66113517-66113518	Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
25	rs562459083	chr11:66113528-66113529	Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
26	rs397509396	chr11:66113551-66113552	Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
27	rs201906152	chr11:66113589-66113590	Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
28	rs375281337	chr11:66113592-66113593	Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
29	rs397509397	chr11:66113600-66113601	Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
30	rs139287952	chr11:66113607-66113608	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
31	rs143223962	chr11:66113622-66113623	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
32	rs75171367	chr11:66113687-66113688	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
33	rs144759932	chr11:66113691-66113692	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
34	rs202227419	chr11:66113693-66113694	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
35	rs11600373	chr11:66113712-66113713	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
36	rs373478461	chr11:66113717-66113718	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
37	rs374928172	chr11:66113749-66113750	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
38	rs188013831	chr11:66113776-66113777	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
39	rs76954213	chr11:66113795-66113796	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
40	rs3741369	chr11:66113912-66113913	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
41	rs200882529	chr11:66113922-66113923	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
42	rs549425584	chr11:66113935-66113936	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
43	rs370222897	chr11:66113938-66113939	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
44	rs373100703	chr11:66113954-66113955	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
45	rs377282346	chr11:66113972-66113973	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
46	rs369602935	chr11:66113973-66113974	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
47	rs372695941	chr11:66113974-66113975	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
48	rs557718654	chr11:66114017-66114018	Bivalent Enhancer Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
49	rs1190625	chr11:66114030-66114031	Bivalent Enhancer Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
50	rs368961025	chr11:66114033-66114034	Bivalent Enhancer Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:97)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Gastric cancer	17908304	CNVD
Multiple myeloma	20724749	CNVD
Wilms tumour	21544195	CNVD
Autism	22495311	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Glioblastoma multiforme	21138945	CNVD
Acute myeloid leukemia	20729466	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	21637783	CNVD
Acute myeloid leukemia	16864856	CNVD
Chronic lymphocytic leukemia	21795749	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	21484798	CNVD
Ewing''s sarcoma	21437220	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	20837533	CNVD
Breast cancer	21264507	CNVD
Cervical cancer	21063398	CNVD
Glioblastoma multiforme	19960244	CNVD
Liposarcoma	21253554	CNVD
Neuroblastoma	18923524	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Neuroblastoma	17533364	CNVD
Breast cancer	21364760	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Prostate cancer	18632612	CNVD
Glioblastoma multiforme	21080181	CNVD
Smith-Lemli-Opitz syndrome	21572526	CNVD
Multiple myeloma	16461302	CNVD
Cancer	16751803	CNVD
Seminomas	18059402	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Metanephric adenoma	20802469	CNVD
Chordoma	21602918	CNVD
Melanoma	18172304	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
ovarian endometriomas	16273235	CNVD
Breast cancer	16417655	CNVD
Myelofibrosis	22110671	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Prostate cancer	17217626	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Breast cancer	21045282	CNVD
Breast cancer	21806811	CNVD
Breast cancer	22002566	CNVD
Ductal carcinoma	18381933	CNVD
Retinoblastoma	22278416	CNVD
Breast cancer	20953835	CNVD
oto-dental syndrome	17656375	CNVD
Asthma	21956041	CNVD
Breast cancer	17603634	CNVD
Ovarian neoplasms	16753589	CNVD
Non-small cell lung cancer	20864512	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cervical cancer	21062161	CNVD
Breast cancer	21509527	CNVD
Anaplastic thyroid cancer	18753363	CNVD
Breast cancer	17001317	CNVD
Oral squamous cell carcinoma	16619035	CNVD
Intracranial aneurysm	16715129	CNVD
Colorectal cancer	16272173	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Colorectal cancer	16882699	CNVD
Berardinelli-seip congenital generalized lipodystrophy	17668395	CNVD
Spinal muscular atrophy	17668395	CNVD
Neonatal seizures	17668395	CNVD
Neonatal seizures	17668391	CNVD
Neuroticism	17667963	CNVD
Cancer	17916600	CNVD
Squamous cell cancer	19047905	CNVD
Multiple endocrine neoplasia type 1	19566914	CNVD
XY sex reversal	17503084	CNVD
Berardinelli-seip congenital generalized lipodystrophy	17668391	CNVD
Maculopathy	17646752	CNVD
Breast cancer	17899364	CNVD
Breast cancer	17157792	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Hodgkin''s lymphoma	17606441	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Cancer	20164919	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Melanoma	20877625	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:903 , 50 per page) page: 1 2 3 4 5 6 7 ... 19

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:66111200-66113000	Active TSS	HUES64 Cell Line	embryonic stem cell
2	chr11:66111200-66115000	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr11:66111400-66112600	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
4	chr11:66111400-66113000	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
5	chr11:66111400-66113000	Active TSS	A549	lung
6	chr11:66111400-66113000	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
7	chr11:66111400-66113200	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
8	chr11:66111600-66112800	Active TSS	iPS-18 Cell Line	embryonic stem cell
9	chr11:66111600-66113000	Active TSS	ES-I3 Cell Line	embryonic stem cell
10	chr11:66111600-66113000	Active TSS	H9 Cell Line	embryonic stem cell
11	chr11:66111600-66113000	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
12	chr11:66111600-66113000	Flanking Active TSS	Primary B cells from cord blood	blood
13	chr11:66111600-66113000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
14	chr11:66111600-66113200	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
15	chr11:66111600-66113200	Flanking Active TSS	Stomach Smooth Muscle	stomach
16	chr11:66111600-66114600	Active TSS	HUES48 Cell Line	embryonic stem cell
17	chr11:66111800-66112600	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
18	chr11:66111800-66112600	Active TSS	Sigmoid Colon	Sigmoid Colon
19	chr11:66111800-66112800	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
20	chr11:66111800-66112800	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
21	chr11:66111800-66112800	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
22	chr11:66111800-66112800	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
23	chr11:66111800-66112800	Active TSS	Esophagus	oesophagus
24	chr11:66111800-66112800	Active TSS	Left Ventricle	heart
25	chr11:66111800-66112800	Active TSS	Psoas Muscle	Psoas
26	chr11:66111800-66112800	Active TSS	Right Atrium	heart
27	chr11:66111800-66112800	Active TSS	Right Ventricle	heart
28	chr11:66111800-66112800	Active TSS	Small Intestine	intestine
29	chr11:66111800-66112800	Active TSS	NHLF	lung
30	chr11:66111800-66113000	Active TSS	ES-WA7 Cell Line	embryonic stem cell
31	chr11:66111800-66113000	Active TSS	iPS-15b Cell Line	embryonic stem cell
32	chr11:66111800-66113000	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
33	chr11:66111800-66113000	Flanking Active TSS	Primary T cells fromperipheralblood	blood
34	chr11:66111800-66113000	Flanking Active TSS	Primary Natural Killer cells fromperipheralblood	blood
35	chr11:66111800-66113000	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
36	chr11:66111800-66113000	Active TSS	Lung	lung
37	chr11:66112000-66112600	Transcr. at gene 5' and 3'	Primary T helper 17 cells PMA-I stimulated	--
38	chr11:66112000-66112600	Active TSS	HMEC	breast
39	chr11:66112000-66112800	Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
40	chr11:66112000-66112800	Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
41	chr11:66112000-66112800	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
42	chr11:66112000-66112800	Active TSS	HUES6 Cell Line	embryonic stem cell
43	chr11:66112000-66112800	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
44	chr11:66112000-66112800	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
45	chr11:66112000-66112800	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
46	chr11:66112000-66112800	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
47	chr11:66112000-66112800	Active TSS	Primary T killer naive cells fromperipheralblood	blood
48	chr11:66112000-66112800	Active TSS	Muscle Satellite Cultured Cells	--
49	chr11:66112000-66112800	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
50	chr11:66112000-66112800	Active TSS	Brain Hippocampus Middle	brain

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