No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs2650755 |
chr19:21579718-21579719 |
Active TSS Weak transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats
|
TF binding region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
2 |
rs181481939 |
chr19:21579738-21579739 |
Active TSS Weak transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs186604497 |
chr19:21579744-21579745 |
Active TSS Weak transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs553967591 |
chr19:21579749-21579750 |
Active TSS Weak transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs565804009 |
chr19:21579767-21579768 |
Active TSS Weak transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs367902748 |
chr19:21579772-21579773 |
Active TSS Weak transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs539743133 |
chr19:21579795-21579796 |
Active TSS Weak transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats
|
TF binding regionCpG island
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs557821683 |
chr19:21579862-21579863 |
Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionCpG island
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs77933789 |
chr19:21579878-21579879 |
Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionCpG island
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs576049999 |
chr19:21579923-21579924 |
Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionCpG island
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs543881669 |
chr19:21579933-21579934 |
Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionCpG island
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs148395876 |
chr19:21579963-21579964 |
Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionCpG island
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs538478491 |
chr19:21579969-21579970 |
Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
14 |
rs372269964 |
chr19:21579991-21579992 |
Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
15 |
rs541230105 |
chr19:21579994-21579995 |
Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
16 |
rs62110379 |
chr19:21580012-21580013 |
Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
17 |
rs375914886 |
chr19:21580032-21580033 |
Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
18 |
rs138674538 |
chr19:21580043-21580044 |
Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
19 |
rs142844983 |
chr19:21580051-21580052 |
Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
20 |
rs374046369 |
chr19:21580076-21580077 |
Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
21 |
rs376449328 |
chr19:21580087-21580088 |
Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
22 |
rs545691546 |
chr19:21580144-21580145 |
Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
23 |
rs563678887 |
chr19:21580225-21580226 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
24 |
rs531203472 |
chr19:21580253-21580254 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
25 |
rs549393217 |
chr19:21580263-21580264 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
26 |
rs567799125 |
chr19:21580300-21580301 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
27 |
rs529001348 |
chr19:21580309-21580310 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
28 |
rs142984957 |
chr19:21580325-21580326 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
29 |
rs565871450 |
chr19:21580335-21580336 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
30 |
rs116391030 |
chr19:21580349-21580350 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
31 |
rs558026667 |
chr19:21580431-21580432 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
32 |
rs570014589 |
chr19:21580560-21580561 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
33 |
rs56170771 |
chr19:21580567-21580568 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
34 |
rs537423061 |
chr19:21580634-21580635 |
Active TSS Weak transcription Flanking Active TSS Enhancers Genic enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
35 |
rs555811908 |
chr19:21580667-21580668 |
Active TSS Weak transcription Flanking Active TSS Enhancers Genic enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
36 |
rs141046158 |
chr19:21580694-21580695 |
Active TSS Weak transcription Flanking Active TSS Enhancers Genic enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
37 |
rs192020696 |
chr19:21580768-21580769 |
Active TSS Weak transcription Flanking Active TSS Enhancers Genic enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
38 |
rs74644149 |
chr19:21580777-21580778 |
Active TSS Weak transcription Flanking Active TSS Enhancers Genic enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
39 |
rs76614290 |
chr19:21580778-21580779 |
Active TSS Weak transcription Flanking Active TSS Enhancers Genic enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
40 |
rs7246684 |
chr19:21580820-21580821 |
Active TSS Weak transcription Flanking Active TSS Enhancers Genic enhancers
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
41 |
rs578116429 |
chr19:21580833-21580834 |
Active TSS Weak transcription Flanking Active TSS Enhancers Genic enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
42 |
rs545323757 |
chr19:21580835-21580836 |
Active TSS Weak transcription Flanking Active TSS Enhancers Genic enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
43 |
rs182010387 |
chr19:21580852-21580853 |
Active TSS Weak transcription Flanking Active TSS Enhancers Genic enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
44 |
rs187664170 |
chr19:21580888-21580889 |
Active TSS Weak transcription Flanking Active TSS Enhancers Genic enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
45 |
rs145134228 |
chr19:21581019-21581020 |
Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers Genic enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
46 |
rs541322172 |
chr19:21581025-21581026 |
Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers Genic enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
47 |
rs561369757 |
chr19:21581060-21581061 |
Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers Genic enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
48 |
rs146844666 |
chr19:21581080-21581081 |
Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers Genic enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
49 |
rs561121704 |
chr19:21581090-21581091 |
Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers Genic enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
50 |
rs547479363 |
chr19:21581163-21581164 |
Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers Genic enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|