Variant report

Variant nsv916012
Chromosome Location chr11:55084067-55622531
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:55110800-55112400 ZNF genes & repeats iPS-18 Cell Line embryonic stem cell
2 chr11:55120800-55121800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr11:55120800-55122200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
4 chr11:55121200-55121600 Enhancers Brain Hippocampus Middle brain
5 chr11:55124200-55124400 ZNF genes & repeats H1 Cell Line embryonic stem cell
6 chr11:55149400-55149800 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
7 chr11:55168200-55169000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
8 chr11:55170600-55173200 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
9 chr11:55190600-55191200 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
10 chr11:55215800-55222400 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
11 chr11:55225400-55225800 Active TSS HSMMtube muscle
12 chr11:55225800-55227600 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
13 chr11:55227400-55227800 Active TSS ES-I3 Cell Line embryonic stem cell
14 chr11:55243200-55243600 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
15 chr11:55260600-55262800 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
16 chr11:55263400-55263600 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
17 chr11:55268600-55270400 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
18 chr11:55269600-55277400 Weak transcription Pancreas Pancrea
19 chr11:55277400-55277800 ZNF genes & repeats Pancreas Pancrea
20 chr11:55277400-55278000 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
21 chr11:55282000-55282400 Active TSS Fetal Heart heart
22 chr11:55312200-55315800 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
23 chr11:55325800-55326000 ZNF genes & repeats iPS-18 Cell Line embryonic stem cell
24 chr11:55337800-55338200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
25 chr11:55338000-55338400 Enhancers ES-I3 Cell Line embryonic stem cell
26 chr11:55340200-55340400 Bivalent Enhancer Aorta Aorta
27 chr11:55353800-55354600 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
28 chr11:55366800-55367200 ZNF genes & repeats Esophagus oesophagus
29 chr11:55395800-55397000 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
30 chr11:55411800-55412000 Active TSS Fetal Brain Male brain
31 chr11:55412000-55421200 Weak transcription Fetal Brain Male brain
32 chr11:55414600-55415000 ZNF genes & repeats Rectal Mucosa Donor 29 rectum
33 chr11:55415000-55416200 Weak transcription Rectal Mucosa Donor 29 rectum
34 chr11:55416200-55416400 ZNF genes & repeats Rectal Mucosa Donor 29 rectum
35 chr11:55421200-55421600 Active TSS Fetal Brain Male brain
36 chr11:55425800-55426600 Enhancers GM12878-XiMat blood
37 chr11:55426200-55426400 Enhancers Rectal Mucosa Donor 29 rectum
38 chr11:55451200-55453000 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
39 chr11:55453400-55454000 Active TSS ES-I3 Cell Line embryonic stem cell
40 chr11:55500200-55500800 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr11:55508400-55508600 Enhancers Esophagus oesophagus
42 chr11:55508400-55508600 ZNF genes & repeats Pancreas Pancrea
43 chr11:55545600-55547200 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
44 chr11:55589400-55590400 ZNF genes & repeats HUES48 Cell Line embryonic stem cell

Quick Search:


  
Input of quick search could be:

what's new

Quick links