No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs547569534 |
chr19:20959535-20959536 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs567875293 |
chr19:20959541-20959542 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs8109027 |
chr19:20959552-20959553 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
Chromatin interactive region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
4 |
rs138087432 |
chr19:20959563-20959564 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs570062876 |
chr19:20959598-20959599 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs62125573 |
chr19:20959611-20959612 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs538988330 |
chr19:20959620-20959621 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs75584677 |
chr19:20959630-20959631 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs73543372 |
chr19:20959646-20959647 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
10 |
rs541375182 |
chr19:20959677-20959678 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs554447352 |
chr19:20959686-20959687 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs149546711 |
chr19:20959687-20959688 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs543259851 |
chr19:20959736-20959737 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs372342244 |
chr19:20959764-20959765 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs62125574 |
chr19:20959782-20959783 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
16 |
rs190212674 |
chr19:20959854-20959855 |
Active TSS Flanking Active TSS Enhancers Weak transcription Genic enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs545382094 |
chr19:20959858-20959859 |
Active TSS Flanking Active TSS Enhancers Weak transcription Genic enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs558957006 |
chr19:20959887-20959888 |
Active TSS Flanking Active TSS Enhancers Weak transcription Genic enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs35730093 |
chr19:20959891-20959892 |
Active TSS Flanking Active TSS Enhancers Weak transcription Genic enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs73007839 |
chr19:20959949-20959950 |
Active TSS Flanking Active TSS Enhancers Weak transcription Genic enhancers
|
Chromatin interactive region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
21 |
rs182597959 |
chr19:20960007-20960008 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs188517947 |
chr19:20960174-20960175 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs12611005 |
chr19:20960182-20960183 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
24 |
rs192916355 |
chr19:20960195-20960196 |
Active TSS Weak transcription Flanking Active TSS Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs185488888 |
chr19:20960221-20960222 |
Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs56177547 |
chr19:20960279-20960280 |
Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs10424826 |
chr19:20960361-20960362 |
Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
28 |
rs570132213 |
chr19:20960422-20960423 |
Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs150715481 |
chr19:20960426-20960427 |
Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs374491074 |
chr19:20960427-20960428 |
Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs188947743 |
chr19:20960441-20960442 |
Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs574731188 |
chr19:20960472-20960473 |
Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
33 |
rs199524174 |
chr19:20960491-20960492 |
Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
34 |
rs562775438 |
chr19:20960494-20960495 |
Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
35 |
rs566109952 |
chr19:20960495-20960496 |
Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
36 |
rs535041769 |
chr19:20960514-20960515 |
Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
37 |
rs554816317 |
chr19:20960526-20960527 |
Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
38 |
rs10425098 |
chr19:20960542-20960543 |
Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Enhancers
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
39 |
rs551704113 |
chr19:20960729-20960730 |
Weak transcription ZNF genes & repeats Enhancers Active TSS Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
40 |
rs556914724 |
chr19:20960759-20960760 |
Weak transcription ZNF genes & repeats Enhancers Active TSS Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
41 |
rs12985214 |
chr19:20960782-20960783 |
Weak transcription ZNF genes & repeats Enhancers Active TSS Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
42 |
rs12984746 |
chr19:20960783-20960784 |
Weak transcription ZNF genes & repeats Enhancers Active TSS Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
43 |
rs565188911 |
chr19:20960800-20960801 |
Weak transcription ZNF genes & repeats Enhancers Active TSS Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
44 |
rs10401248 |
chr19:20960817-20960818 |
Weak transcription ZNF genes & repeats Enhancers
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
45 |
rs148253381 |
chr19:20960839-20960840 |
Weak transcription ZNF genes & repeats Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
46 |
rs141196537 |
chr19:20960901-20960902 |
Weak transcription ZNF genes & repeats Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
47 |
rs7259970 |
chr19:20960943-20960944 |
Weak transcription ZNF genes & repeats Enhancers
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
48 |
rs561583621 |
chr19:20960948-20960949 |
Weak transcription ZNF genes & repeats Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
49 |
rs530373101 |
chr19:20960966-20960967 |
Weak transcription ZNF genes & repeats Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
50 |
rs147370317 |
chr19:20960968-20960969 |
Weak transcription ZNF genes & repeats Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|