Variant report

Variant	nsv984561
Chromosome Location	chr9:140319247-140358257
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2444)
CpG islands
(count:2811)
Chromatin interactive
region (count:160)
LncRNA
region (count:0)
Mature miRNA
region (count: 2)
miRNA target
sites (count:0)

(count:2444 , 50 per page) page: 1 2 3 4 5 6 7 ... 49

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:140339716-140339973	K562	blood:	n/a	n/a
2	ARID3A	chr9:140353775-140353946	HepG2	liver:	n/a	n/a
3	ARID3A	chr9:140349505-140349575	K562	blood:	n/a	n/a
4	ARID3A	chr9:140339748-140340324	HepG2	liver:	n/a	n/a
5	ARID3A	chr9:140336023-140336143	HepG2	liver:	n/a	n/a
6	ARID3A	chr9:140349264-140349724	HepG2	liver:	n/a	n/a
7	ATF1	chr9:140353686-140354042	K562	blood:	n/a	n/a
8	ATF2	chr9:140353700-140354020	GM12878	blood:	n/a	n/a
9	ATF2	chr9:140335825-140336079	H1-hESC	embryonic stem cell:	n/a	n/a
10	ATF2	chr9:140356259-140356799	GM12878	blood:	n/a	n/a
11	ATF2	chr9:140339651-140340225	GM12878	blood:	n/a	n/a
12	ATF2	chr9:140339754-140340081	GM12878	blood:	n/a	n/a
13	ATF3	chr9:140330418-140330732	K562	blood:	n/a	n/a
14	ATF3	chr9:140319258-140319566	K562	blood:	n/a	chr9:140319424-140319433
15	ATF3	chr9:140339807-140340056	K562	blood:	n/a	n/a
16	ATF3	chr9:140330483-140330784	K562	blood:	n/a	n/a
17	ATF3	chr9:140339735-140340110	K562	blood:	n/a	n/a
18	ATF3	chr9:140353730-140354018	K562	blood:	n/a	chr9:140353933-140353942
19	ATF3	chr9:140324693-140324963	K562	blood:	n/a	n/a
20	BACH1	chr9:140335816-140336283	H1-hESC	embryonic stem cell:	n/a	n/a
21	BACH1	chr9:140348915-140348937	H1-hESC	embryonic stem cell:	n/a	n/a
22	BACH1	chr9:140353567-140353571	H1-hESC	embryonic stem cell:	n/a	n/a
23	BATF	chr9:140339791-140340143	GM12878	blood:	n/a	n/a
24	BATF	chr9:140339767-140340162	GM12878	blood:	n/a	n/a
25	BCLAF1	chr9:140339683-140340185	GM12878	blood:	n/a	chr9:140340123-140340136
26	BHLHE40	chr9:140349078-140349719	HepG2	liver:	n/a	n/a
27	BHLHE40	chr9:140353464-140354014	K562	blood:	n/a	chr9:140353759-140353775 chr9:140353733-140353749
28	BHLHE40	chr9:140319221-140319723	GM12878	blood:	n/a	chr9:140319422-140319435
29	BHLHE40	chr9:140339825-140340146	HepG2	liver:	n/a	n/a
30	BHLHE40	chr9:140335960-140336268	K562	blood:	n/a	chr9:140336207-140336223 chr9:140336109-140336125
31	BHLHE40	chr9:140344849-140345128	GM12878	blood:	n/a	n/a
32	BHLHE40	chr9:140319133-140319761	K562	blood:	n/a	chr9:140319422-140319435
33	BHLHE40	chr9:140335916-140336354	HepG2	liver:	n/a	chr9:140336207-140336223 chr9:140336109-140336125
34	BHLHE40	chr9:140353589-140353958	HepG2	liver:	n/a	chr9:140353759-140353775 chr9:140353733-140353749
35	BHLHE40	chr9:140345383-140345496	HepG2	liver:	n/a	n/a
36	BHLHE40	chr9:140336081-140336260	HepG2	liver:	n/a	chr9:140336207-140336223 chr9:140336109-140336125
37	BHLHE40	chr9:140320012-140320331	K562	blood:	n/a	n/a
38	BHLHE40	chr9:140353600-140354010	GM12878	blood:	n/a	chr9:140353759-140353775 chr9:140353733-140353749
39	BHLHE40	chr9:140344739-140345154	HepG2	liver:	n/a	n/a
40	BHLHE40	chr9:140354272-140354390	K562	blood:	n/a	n/a
41	BHLHE40	chr9:140324841-140325012	GM12878	blood:	n/a	n/a
42	BHLHE40	chr9:140339661-140340154	K562	blood:	n/a	n/a
43	BHLHE40	chr9:140330508-140330812	K562	blood:	n/a	n/a
44	BHLHE40	chr9:140340634-140340642	K562	blood:	n/a	n/a
45	BHLHE40	chr9:140356194-140356914	K562	blood:	n/a	n/a
46	BHLHE40	chr9:140356258-140356800	GM12878	blood:	n/a	n/a
47	BHLHE40	chr9:140336146-140336155	GM12878	blood:	n/a	n/a
48	BHLHE40	chr9:140324636-140325032	K562	blood:	n/a	n/a
49	BHLHE40	chr9:140349306-140349664	K562	blood:	n/a	n/a
50	BHLHE40	chr9:140339639-140340255	GM12878	blood:	n/a	n/a

(count:2811 , 50 per page) page: 1 2 3 4 5 6 7 ... 57

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:140333805-140333855	IMR90	lung:	fetal
2	chr9:140330627-140330677	HPAEpiC	pulmonary alveolar:	n/a
3	chr9:140333805-140333855	SK-N-MC	brain:	n/a
4	chr9:140346899-140346949	NB4	blood:	n/a
5	chr9:140321149-140321199	NH-A	brain:	n/a
6	chr9:140333805-140333855	IMR90	lung:	fetal
7	chr9:140330627-140330677	HPAEpiC	pulmonary alveolar:	n/a
8	chr9:140333805-140333855	SK-N-MC	brain:	n/a
9	chr9:140346899-140346949	NB4	blood:	n/a
10	chr9:140321149-140321199	NH-A	brain:	n/a
11	chr9:140346864-140346914	IMR90	lung:	fetal
12	chr9:140331284-140331334	GM06990	blood:	n/a
13	chr9:140340778-140340828	HCF	heart:	n/a
14	chr9:140341606-140341656	PrEC	prostate:	n/a
15	chr9:140331284-140331334	SAEC	small airway:	n/a
16	chr9:140333362-140333412	MCF-7	breast:	n/a
17	chr9:140333805-140333855	A549	lung:	n/a
18	chr9:140354241-140354291	SK-N-SH_RA	brain:	n/a
19	chr9:140333362-140333412	AG04449	skin:	fetal
20	chr9:140348828-140348878	AG10803	skin:	n/a
21	chr9:140349969-140350019	BJ	skin:	n/a
22	chr9:140348014-140348064	A549	lung:	n/a
23	chr9:140331582-140331632	HCM	heart:	n/a
24	chr9:140355163-140355213	GM12878	blood:	n/a
25	chr9:140329570-140329620	T-47D	breast:	n/a
26	chr9:140329570-140329620	SK-N-SH_RA	brain:	n/a
27	chr9:140348828-140348878	GM12891	blood:	n/a
28	chr9:140356475-140356525	PANC-1	pancreas:	n/a
29	chr9:140355163-140355213	GM12891	blood:	n/a
30	chr9:140356830-140356880	PANC-1	pancreas:	n/a
31	chr9:140357706-140357756	ovcar-3	ovarian:	n/a
32	chr9:140341606-140341656	MCF-7	breast:	n/a
33	chr9:140327546-140327596	HRCEpiC	kidney:	n/a
34	chr9:140352318-140352368	ovcar-3	ovarian:	n/a
35	chr9:140352318-140352368	ProgFib	skin:	n/a
36	chr9:140340778-140340828	HPAEpiC	pulmonary alveolar:	n/a
37	chr9:140331582-140331632	AG04449	skin:	fetal
38	chr9:140353961-140354011	AG09309	skin:	n/a
39	chr9:140348014-140348064	GM12892	blood:	n/a
40	chr9:140356757-140356807	SK-N-SH_RA	brain:	n/a
41	chr9:140343854-140343904	AG09319	gingival:	n/a
42	chr9:140353475-140353525	HNPCEpiC	eye:	n/a
43	chr9:140349969-140350019	HCPEpiC	choroid plexus:	n/a
44	chr9:140333805-140333855	BE2_C	brain:	n/a
45	chr9:140336227-140336277	HEEpiC	esophagus:	n/a
46	chr9:140328888-140328938	MCF10A-Er-Src	breast:	n/a
47	chr9:140355163-140355213	PFSK-1	brain:	n/a
48	chr9:140357706-140357756	BE2_C	brain:	n/a
49	chr9:140336563-140336613	T-47D	breast:	n/a
50	chr9:140335857-140335907	GM19239	blood:	n/a

(count:160 , 50 per page) page: 1 2 3 4

No.	Distal block	Cell Line	Cell type
1	chr9:140328603..140331524-chr9:140339859..140341815,2	MCF-7	breast:
2	chr9:140188619..140191530-chr9:140336110..140337703,2	MCF-7	breast:
3	chr9:140317035..140319771-chr9:140337016..140339770,3	K562	blood:
4	chr9:140144114..140146469-chr9:140324868..140328806,3	K562	blood:
5	chr9:140310300..140312402-chr9:140318034..140320009,2	MCF-7	breast:
6	chr9:140316257..140317769-chr9:140352568..140355064,2	K562	blood:
7	chr9:140188697..140191743-chr9:140316261..140319603,8	MCF-7	breast:
8	chr9:140315974..140319216-chr9:140351199..140355551,4	MCF-7	breast:
9	chr9:140192198..140198165-chr9:140316235..140327530,20	K562	blood:
10	chr9:140329147..140333153-chr9:140334253..140339110,10	MCF-7	breast:
11	chr9:140321975..140325004-chr9:140345240..140348026,3	MCF-7	breast:
12	chr9:140325901..140335846-chr9:140346696..140354798,14	K562	blood:
13	chr9:140189561..140190480-chr9:140339770..140340606,3	K562	blood:
14	chr9:140193656..140198673-chr9:140329050..140337375,14	K562	blood:
15	chr17:62502544..62503507-chr9:140352975..140353583,2	Hela-S3	cervix:
16	chr9:140135678..140137635-chr9:140352214..140353821,2	K562	blood:
17	chr9:140329350..140331152-chr9:140443014..140444997,2	MCF-7	breast:
18	chr9:140328788..140330687-chr9:140382717..140384936,2	K562	blood:
19	chr9:140188775..140193297-chr9:140352030..140355561,5	K562	blood:
20	chr9:139979763..139981414-chr9:140352463..140355092,2	K562	blood:
21	chr9:140195080..140197126-chr9:140323595..140326447,3	K562	blood:
22	chr9:140194400..140197324-chr9:140354882..140357800,3	MCF-7	breast:
23	chr9:140330654..140334741-chr9:140346905..140349971,3	MCF-7	breast:
24	chr9:140316188..140319616-chr9:140334398..140338058,5	MCF-7	breast:
25	chr9:140142701..140144932-chr9:140317932..140319730,2	MCF-7	breast:
26	chr9:140329342..140332145-chr9:140342515..140344270,2	MCF-7	breast:
27	chr2:676897..677660-chr9:140353219..140353959,2	Hela-S3	cervix:
28	chr9:140264259..140266267-chr9:140324042..140326278,2	K562	blood:
29	chr9:140339107..140341756-chr9:140342084..140345121,4	MCF-7	breast:
30	chr9:140352557..140355387-chr9:140371788..140374935,3	MCF-7	breast:
31	chr9:140193633..140197906-chr9:140314272..140320023,12	K562	blood:
32	chr9:140334848..140337277-chr9:140353292..140355105,2	MCF-7	breast:
33	chr9:140354790..140356755-chr9:140406317..140408071,2	K562	blood:
34	chr9:140316188..140319616-chr9:140334398..140338058,5	MCF-7	breast:
35	chr9:140189738..140190666-chr9:140339488..140340122,3	MCF-7	breast:
36	chr9:140351004..140356661-chr9:140371273..140378307,10	MCF-7	breast:
37	chr9:140189132..140191580-chr9:140319161..140320665,2	K562	blood:
38	chr9:140320912..140322713-chr9:140405258..140407507,2	MCF-7	breast:
39	chr9:140187521..140190515-chr9:140347544..140351878,5	K562	blood:
40	chr9:140322924..140326598-chr9:140339996..140343918,4	K562	blood:
41	chr10:60094527..60095265-chr9:140353554..140354223,2	HCT-116	colon:
42	chr9:140329342..140332145-chr9:140342515..140344270,2	MCF-7	breast:
43	chr9:140169668..140172993-chr9:140345187..140348460,4	K562	blood:
44	chr9:140188984..140190605-chr9:140340342..140342042,2	K562	blood:
45	chr9:140189492..140190310-chr9:140339405..140340198,3	MCF-7	breast:
46	chr9:140190600..140200304-chr9:140345387..140357836,26	K562	blood:
47	chr9:140135352..140138332-chr9:140324812..140326408,2	K562	blood:
48	chr9:140316449..140319245-chr9:140352297..140354187,2	K562	blood:
49	chr9:140193764..140196943-chr9:140350718..140357972,9	K562	blood:
50	chr9:140353788..140359040-chr9:140385385..140389520,8	K562	blood:

No data

miRNA name	Chromosome Location	mirBase accession
hsa-miR-7114-5p	chr9:140344513-140344533	MIMAT0028125
hsa-miR-7114-3p	chr9:140344478-140344498	MIMAT0028126

No data

Variant related genes	Relation type
EXD3	TF binding region
ENTPD8	TF binding region
NSMF	TF binding region
EXD3	CpG island
ENTPD8	CpG island
NSMF	CpG island
ENSG00000165724	chromatin interactions
ENSG00000188833	chromatin interactions
ENSG00000187609	chromatin interactions
ENSG00000233296	chromatin interactions
ENSG00000135829	chromatin interactions
ENSG00000143578	chromatin interactions
ENSG00000197191	chromatin interactions
ENSG00000266402	chromatin interactions
ENSG00000260996	chromatin interactions
ENSG00000124216	chromatin interactions
ENSG00000130653	chromatin interactions
ENSG00000120889	chromatin interactions
ENSG00000143570	chromatin interactions
ENSG00000188747	chromatin interactions
ENSG00000199753	chromatin interactions
ENSG00000198113	chromatin interactions
ENSG00000165716	chromatin interactions
ENSG00000165802	chromatin interactions
ENSG00000072401	chromatin interactions
ENSG00000197768	chromatin interactions
ENSG00000258890	chromatin interactions
ENSG00000182154	chromatin interactions
ENSG00000176058	chromatin interactions
ENSG00000177239	chromatin interactions
ENSG00000188986	chromatin interactions
ENSG00000100664	chromatin interactions
ENSG00000087087	chromatin interactions
ENSG00000268996	chromatin interactions
ENSG00000176101	chromatin interactions
ENSG00000188229	chromatin interactions
ENSG00000151353	chromatin interactions
ENSG00000176248	chromatin interactions
ENSG00000108654	chromatin interactions
ENSG00000198435	chromatin interactions
ENSG00000188163	chromatin interactions
ENSG00000169714	chromatin interactions

Extended variants
information (count: 2083 )
Associated
traits (count: 20 )

Variant overlapped rSNPs/rCNVs (count:2083 , 50 per page) page: 1 2 3 4 5 6 7 ... 42

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs566780677	chr9:140319260-140319261	Enhancers Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
2	rs538984742	chr9:140319277-140319278	Enhancers Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
3	rs558880420	chr9:140319329-140319330	Enhancers Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
4	rs552125363	chr9:140319346-140319347	Enhancers Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
5	rs575820809	chr9:140319356-140319357	Enhancers Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
6	rs11507672	chr9:140319422-140319423	Enhancers Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	5 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
7	rs573679233	chr9:140319425-140319426	Enhancers Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
8	rs7850589	chr9:140319428-140319429	Enhancers Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	5 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs559401223	chr9:140319435-140319436	Enhancers Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
10	rs573165271	chr9:140319445-140319446	Enhancers Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
11	rs117414495	chr9:140319472-140319473	Enhancers Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
12	rs557847939	chr9:140319487-140319488	Enhancers Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
13	rs11537106	chr9:140319497-140319498	Enhancers Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	5 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
14	rs530695554	chr9:140319509-140319510	Enhancers Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
15	rs146522463	chr9:140319536-140319537	Enhancers Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
16	rs139067844	chr9:140319572-140319573	Enhancers Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
17	rs11562621	chr9:140319598-140319599	Enhancers Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	5 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
18	rs374481764	chr9:140319621-140319622	Enhancers Weak transcription Genic enhancers Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
19	rs79643463	chr9:140319644-140319645	Enhancers Weak transcription Genic enhancers Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
20	rs556297691	chr9:140319681-140319682	Enhancers Weak transcription Genic enhancers Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
21	rs576368266	chr9:140319684-140319685	Enhancers Weak transcription Genic enhancers Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
22	rs76733695	chr9:140319690-140319691	Enhancers Weak transcription Genic enhancers Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
23	rs34281411	chr9:140319765-140319766	Enhancers Weak transcription Genic enhancers Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
24	rs115252886	chr9:140319860-140319861	Enhancers Weak transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
25	rs117776327	chr9:140319874-140319875	Enhancers Weak transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
26	rs149349944	chr9:140319909-140319910	Enhancers Weak transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
27	rs527702466	chr9:140319930-140319931	Enhancers Weak transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
28	rs186983417	chr9:140319941-140319942	Enhancers Weak transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
29	rs192319006	chr9:140319951-140319952	Enhancers Weak transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
30	rs370078437	chr9:140319971-140319972	Enhancers Weak transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
31	rs181429905	chr9:140319983-140319984	Enhancers Weak transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
32	rs185958830	chr9:140319984-140319985	Enhancers Weak transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
33	rs544692907	chr9:140319990-140319991	Enhancers Weak transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
34	rs75949617	chr9:140320046-140320047	Enhancers Weak transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
35	rs79215766	chr9:140320075-140320076	Enhancers Weak transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
36	rs190029580	chr9:140320118-140320119	Enhancers Weak transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
37	rs564609234	chr9:140320130-140320131	Enhancers Weak transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
38	rs575452438	chr9:140320133-140320134	Enhancers Weak transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
39	rs114137501	chr9:140320136-140320137	Enhancers Weak transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
40	rs11522284	chr9:140320172-140320173	Enhancers Weak transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
41	rs560964302	chr9:140320173-140320174	Enhancers Weak transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
42	rs67640500	chr9:140320180-140320181	Enhancers Weak transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
43	rs148262355	chr9:140320209-140320210	Enhancers Weak transcription Strong transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
44	rs560096933	chr9:140320241-140320242	Enhancers Weak transcription Strong transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
45	rs532339994	chr9:140320278-140320279	Enhancers Weak transcription Strong transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
46	rs182657139	chr9:140320307-140320308	Enhancers Weak transcription Strong transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
47	rs577104589	chr9:140320323-140320324	Enhancers Weak transcription Strong transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
48	rs569491386	chr9:140320351-140320352	Enhancers Weak transcription Strong transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
49	rs538168615	chr9:140320378-140320379	Enhancers Weak transcription Strong transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
50	rs548754307	chr9:140320487-140320488	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:20)

Disease	PMID	Source
Leukemia	17361228	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Glioblastoma	16823260	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Cardiac fibroma	18329553	CNVD
Lung cancer	19147751	CNVD
Cervical cancer	17311676	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Gastric cancer	17908304	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Chordoma	18071362	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Sudden cardiac death	19188705	CNVD
Myoepithelioma	18604193	CNVD
Tuberous sclerosis	19566914	CNVD
Multiple myeloma	16616336	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Mantle cell lymphoma	19029149	CNVD
Breast cancer	21509527	CNVD

Chromatin state (count:2484 , 50 per page) page: 1 2 3 4 5 6 7 ... 50

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:140318000-140319600	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
2	chr9:140318400-140319400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
3	chr9:140318400-140319600	Flanking Active TSS	Duodenum Mucosa	Duodenum
4	chr9:140318400-140319600	Enhancers	Placenta	Placenta
5	chr9:140318400-140319600	Flanking Active TSS	Hela-S3	cervix
6	chr9:140318400-140319600	Enhancers	NH-A	brain
7	chr9:140318400-140319800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
8	chr9:140318400-140319800	Enhancers	Muscle Satellite Cultured Cells	--
9	chr9:140318400-140319800	Enhancers	NHDF-Ad	bronchial
10	chr9:140318400-140320600	Enhancers	Fetal Muscle Trunk	muscle
11	chr9:140318400-140320800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr9:140318600-140319400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
13	chr9:140318600-140319400	Enhancers	Duodenum Smooth Muscle	Duodenum
14	chr9:140318600-140319600	Enhancers	HSMMtube	muscle
15	chr9:140318600-140319600	Flanking Active TSS	K562	blood
16	chr9:140318600-140319600	Enhancers	NHLF	lung
17	chr9:140318600-140320800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
18	chr9:140318600-140321000	Enhancers	HMEC	breast
19	chr9:140318600-140325000	Weak transcription	Brain Cingulate Gyrus	brain
20	chr9:140318600-140335800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
21	chr9:140318800-140319400	Enhancers	Primary hematopoietic stem cells short term culture	blood
22	chr9:140318800-140319400	Enhancers	Brain Angular Gyrus	brain
23	chr9:140318800-140319400	Weak transcription	Brain Inferior Temporal Lobe	brain
24	chr9:140318800-140319400	Enhancers	Lung	lung
25	chr9:140318800-140319600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
26	chr9:140318800-140319600	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
27	chr9:140318800-140319600	Enhancers	Primary monocytes fromperipheralblood	blood
28	chr9:140318800-140319600	Enhancers	Adipose Nuclei	Adipose
29	chr9:140318800-140319600	Enhancers	Fetal Muscle Leg	muscle
30	chr9:140318800-140319600	Enhancers	Gastric	stomach
31	chr9:140318800-140319600	Enhancers	Left Ventricle	heart
32	chr9:140318800-140319800	Enhancers	Skeletal Muscle Female	skeletal muscle
33	chr9:140318800-140319800	Enhancers	Stomach Smooth Muscle	stomach
34	chr9:140318800-140319800	Enhancers	HSMM	muscle
35	chr9:140318800-140320000	Enhancers	Breast Myoepithelial Primary Cells	Breast
36	chr9:140318800-140320200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
37	chr9:140318800-140320400	Weak transcription	Spleen	Spleen
38	chr9:140318800-140320600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
39	chr9:140318800-140320800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
40	chr9:140318800-140320800	Enhancers	Esophagus	oesophagus
41	chr9:140318800-140320800	Enhancers	Pancreas	Pancrea
42	chr9:140318800-140321000	Enhancers	Skeletal Muscle Male	skeletal muscle
43	chr9:140318800-140322200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
44	chr9:140318800-140322600	Weak transcription	Primary B cells from cord blood	blood
45	chr9:140318800-140323400	Weak transcription	Stomach Mucosa	stomach
46	chr9:140318800-140324000	Weak transcription	Ovary	ovary
47	chr9:140318800-140324600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
48	chr9:140318800-140329200	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
49	chr9:140318800-140329600	Weak transcription	Sigmoid Colon	Sigmoid Colon
50	chr9:140318800-140330800	Weak transcription	Brain Hippocampus Middle	brain

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