Variant report

Variant	rs10000363
Chromosome Location	chr4:166340223-166340224
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs10222903	0.80[AMR][1000 genomes];0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs17687125	1.00[CEU][hapmap];0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28846814	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4691192	0.81[EUR][1000 genomes]
rs55685623	0.81[EUR][1000 genomes]
rs6836074	0.88[CEU][hapmap];0.80[AMR][1000 genomes];0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6837498	1.00[CEU][hapmap];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6841638	0.90[CEU][hapmap];0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs73007499	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7664597	0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9968549	0.80[AMR][1000 genomes];0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:166319600-166361800	Weak transcription	Brain Inferior Temporal Lobe	brain
2	chr4:166326800-166364400	Weak transcription	Brain Germinal Matrix	brain
3	chr4:166334800-166342600	Weak transcription	Brain Cingulate Gyrus	brain
4	chr4:166334800-166348000	Weak transcription	Pancreas	Pancrea
5	chr4:166335000-166342400	Weak transcription	HepG2	liver
6	chr4:166337400-166348200	Weak transcription	Aorta	Aorta
7	chr4:166337600-166346600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr4:166338600-166340600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr4:166339600-166342400	Weak transcription	Cortex derived primary cultured neurospheres	brain
10	chr4:166339600-166342400	Weak transcription	Brain Substantia Nigra	brain
11	chr4:166339600-166344200	Weak transcription	Brain Angular Gyrus	brain
12	chr4:166339800-166342400	Weak transcription	Pancreatic Islets	Pancreatic Islet
13	chr4:166340000-166340800	Weak transcription	Brain Hippocampus Middle	brain
14	chr4:166340000-166342400	Weak transcription	Fetal Brain Male	brain
15	chr4:166340000-166358800	Weak transcription	Fetal Brain Female	brain
16	chr4:166340200-166341000	Enhancers	Brain Anterior Caudate	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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