Variant report

Variant	rs6841638
Chromosome Location	chr4:166369661-166369662
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10000363	0.90[CEU][hapmap];0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10021007	0.95[YRI][hapmap];0.97[AFR][1000 genomes]
rs10222903	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17687125	0.89[CEU][hapmap];0.92[CHB][hapmap];0.90[JPT][hapmap];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2083158	0.92[YRI][hapmap]
rs2083159	0.96[YRI][hapmap];0.89[AFR][1000 genomes]
rs28668614	0.82[AFR][1000 genomes]
rs28846814	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6836074	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6837498	0.91[CEU][hapmap];0.93[CHB][hapmap];0.92[JPT][hapmap];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6842167	0.91[YRI][hapmap];0.91[AFR][1000 genomes]
rs73007499	0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7441041	1.00[YRI][hapmap];0.88[AFR][1000 genomes]
rs7664597	0.92[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9968549	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:166361800-166375200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr4:166362200-166381600	Weak transcription	Fetal Stomach	stomach
3	chr4:166362400-166381600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr4:166362400-166382400	Weak transcription	Aorta	Aorta
5	chr4:166362400-166384600	Weak transcription	Brain Cingulate Gyrus	brain
6	chr4:166362600-166370000	Weak transcription	Pancreatic Islets	Pancreatic Islet
7	chr4:166362600-166379000	Weak transcription	Fetal Brain Female	brain
8	chr4:166362800-166379200	Weak transcription	Brain Anterior Caudate	brain
9	chr4:166364400-166374800	Weak transcription	HepG2	liver

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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