Variant report

Variant	rs7441041
Chromosome Location	chr4:166364148-166364149
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10021007	0.95[YRI][hapmap];0.88[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs10222710	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10222903	0.88[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs10223009	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1898593	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[YRI][hapmap];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2083158	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.88[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2083159	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28421837	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs28668614	0.94[AFR][1000 genomes];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4690816	0.85[CEU][hapmap];0.95[CHB][hapmap];0.87[JPT][hapmap];0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4691195	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4691197	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6836074	1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs6841638	1.00[YRI][hapmap];0.88[AFR][1000 genomes]
rs6842167	0.93[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6853271	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7663386	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7663945	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7664597	0.95[AFR][1000 genomes]
rs7671073	0.82[CHB][hapmap];0.86[EUR][1000 genomes]
rs9968549	0.88[AFR][1000 genomes];0.81[AMR][1000 genomes]

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:166326800-166364400	Weak transcription	Brain Germinal Matrix	brain
2	chr4:166352600-166366400	Weak transcription	Pancreas	Pancrea
3	chr4:166360000-166365400	Enhancers	Breast Myoepithelial Primary Cells	Breast
4	chr4:166361800-166375200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr4:166362200-166381600	Weak transcription	Fetal Stomach	stomach
6	chr4:166362400-166367600	Weak transcription	Brain Hippocampus Middle	brain
7	chr4:166362400-166381600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr4:166362400-166382400	Weak transcription	Aorta	Aorta
9	chr4:166362400-166384600	Weak transcription	Brain Cingulate Gyrus	brain
10	chr4:166362600-166364800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
11	chr4:166362600-166370000	Weak transcription	Pancreatic Islets	Pancreatic Islet
12	chr4:166362600-166379000	Weak transcription	Fetal Brain Female	brain
13	chr4:166362800-166379200	Weak transcription	Brain Anterior Caudate	brain
14	chr4:166363000-166364600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
15	chr4:166364000-166364200	Enhancers	HepG2	liver

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