The 2.0 version of rSNPBase

Variant report

Variant rs10003554
Chromosome Location chr4:8382659-8382660
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:8355800-8384800 Weak transcription Fetal Lung lung
2 chr4:8360400-8394000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr4:8360400-8395600 Weak transcription NHEK skin
4 chr4:8362000-8395400 Weak transcription Fetal Brain Male brain
5 chr4:8364000-8383400 Weak transcription Colonic Mucosa Colon
6 chr4:8364000-8388600 Weak transcription Rectal Mucosa Donor 31 rectum
7 chr4:8364200-8387000 Weak transcription Dnd41 blood
8 chr4:8364800-8387000 Weak transcription Rectal Mucosa Donor 29 rectum
9 chr4:8364800-8392400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr4:8365000-8382800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
11 chr4:8365000-8385000 Strong transcription Breast Myoepithelial Primary Cells Breast
12 chr4:8365200-8385000 Weak transcription NHLF lung
13 chr4:8365400-8383600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr4:8365600-8388800 Weak transcription Primary B cells from peripheral blood blood
15 chr4:8365800-8383600 Strong transcription Fetal Stomach stomach
16 chr4:8366000-8382800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
17 chr4:8366400-8411600 Weak transcription Primary T killer naive cells fromperipheralblood blood
18 chr4:8366800-8386000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr4:8366800-8390000 Weak transcription Primary T helper cells PMA-I stimulated --
20 chr4:8367400-8384800 Weak transcription Primary neutrophils fromperipheralblood blood
21 chr4:8367400-8386800 Weak transcription Primary B cells from cord blood blood
22 chr4:8367800-8384800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr4:8368400-8388400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
24 chr4:8368800-8384200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
25 chr4:8368800-8386600 Weak transcription Monocytes-CD14+_RO01746 blood
26 chr4:8368800-8388800 Weak transcription Primary T cells fromperipheralblood blood
27 chr4:8371400-8383200 Strong transcription Ovary ovary
28 chr4:8371600-8383200 Strong transcription Lung lung
29 chr4:8372200-8387000 Strong transcription Pancreas Pancrea
30 chr4:8372600-8384000 Strong transcription Placenta Placenta
31 chr4:8372600-8389800 Strong transcription Esophagus oesophagus
32 chr4:8372800-8385000 Weak transcription Placenta Amnion Placenta Amnion
33 chr4:8373000-8385000 Strong transcription Stomach Smooth Muscle stomach
34 chr4:8373000-8388200 Weak transcription Osteobl bone
35 chr4:8373200-8384800 Weak transcription Rectal Smooth Muscle rectum
36 chr4:8373400-8401600 Strong transcription Fetal Intestine Small intestine
37 chr4:8374600-8383600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr4:8374800-8386800 Weak transcription Primary hematopoietic stem cells blood
39 chr4:8375000-8401600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
40 chr4:8375400-8383400 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr4:8375400-8383600 Strong transcription Spleen Spleen
42 chr4:8375400-8383800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr4:8376200-8386400 Weak transcription Primary T helper cells fromperipheralblood blood
44 chr4:8376400-8386600 Weak transcription Primary monocytes fromperipheralblood blood
45 chr4:8376600-8384200 Strong transcription Aorta Aorta
46 chr4:8376600-8386200 Weak transcription Brain Angular Gyrus brain
47 chr4:8377000-8388800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
48 chr4:8377400-8385200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr4:8378000-8391800 Strong transcription Fetal Brain Female brain
50 chr4:8378200-8383000 Strong transcription Duodenum Smooth Muscle Duodenum

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Last update: Aug 31, 2015