The 2.0 version of rSNPBase

Variant report

Variant rs73209489
Chromosome Location chr4:8398560-8398561
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:8366400-8411600 Weak transcription Primary T killer naive cells fromperipheralblood blood
2 chr4:8373400-8401600 Strong transcription Fetal Intestine Small intestine
3 chr4:8375000-8401600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
4 chr4:8378600-8398600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr4:8378600-8398800 Weak transcription ES-WA7 Cell Line embryonic stem cell
6 chr4:8381800-8398600 Weak transcription H9 Cell Line embryonic stem cell
7 chr4:8382400-8401600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
8 chr4:8383800-8419000 Weak transcription Pancreatic Islets Pancreatic Islet
9 chr4:8384000-8399600 Strong transcription Spleen Spleen
10 chr4:8384800-8401600 Strong transcription Thymus Thymus
11 chr4:8384800-8418600 Strong transcription Primary T cells from cord blood blood
12 chr4:8385200-8411600 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr4:8385600-8407000 Weak transcription Stomach Mucosa stomach
14 chr4:8386400-8408400 Strong transcription Fetal Intestine Large intestine
15 chr4:8386600-8398600 Strong transcription Monocytes-CD14+_RO01746 blood
16 chr4:8386600-8399400 Strong transcription Primary monocytes fromperipheralblood blood
17 chr4:8386600-8400600 Strong transcription Primary hematopoietic stem cells short term culture blood
18 chr4:8387400-8399600 Weak transcription Primary T helper naive cells from peripheral blood blood
19 chr4:8387400-8412000 Weak transcription iPS-15b Cell Line embryonic stem cell
20 chr4:8388400-8399200 Strong transcription Liver Liver
21 chr4:8389000-8399600 Strong transcription Pancreas Pancrea
22 chr4:8389400-8399200 Genic enhancers Fetal Muscle Trunk muscle
23 chr4:8389400-8399200 Genic enhancers Fetal Muscle Leg muscle
24 chr4:8389800-8411400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
25 chr4:8391200-8406400 Weak transcription Fetal Thymus thymus
26 chr4:8393600-8401600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr4:8393600-8401800 Strong transcription Primary T helper cells PMA-I stimulated --
28 chr4:8393800-8401400 Strong transcription Gastric stomach
29 chr4:8394000-8401600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr4:8394200-8398800 Weak transcription iPS-20b Cell Line embryonic stem cell
31 chr4:8394200-8407400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
32 chr4:8394600-8400000 Weak transcription Rectal Mucosa Donor 29 rectum
33 chr4:8394800-8403200 Weak transcription Psoas Muscle Psoas
34 chr4:8394800-8409400 Weak transcription Small Intestine intestine
35 chr4:8395400-8399600 Strong transcription Primary T regulatory cells fromperipheralblood blood
36 chr4:8395800-8398800 Weak transcription H1 Cell Line embryonic stem cell
37 chr4:8395800-8398800 Weak transcription HUES6 Cell Line embryonic stem cell
38 chr4:8395800-8411800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr4:8396000-8400400 Weak transcription Rectal Mucosa Donor 31 rectum
40 chr4:8396000-8401400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr4:8396000-8401400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr4:8396200-8399400 Weak transcription Primary hematopoietic stem cells blood
43 chr4:8396400-8398600 Weak transcription HUES64 Cell Line embryonic stem cell
44 chr4:8396400-8398800 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
45 chr4:8396400-8400400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
46 chr4:8396400-8404800 Weak transcription A549 lung
47 chr4:8396400-8405800 Weak transcription GM12878-XiMat blood
48 chr4:8396600-8398600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
49 chr4:8396600-8400200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr4:8396600-8400600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin

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Last update: Aug 31, 2015