Variant report

Variant rs1000709
Chromosome Location chr9:117237754-117237755
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:117203000-117237800 Weak transcription Placenta Amnion Placenta Amnion
2 chr9:117217800-117242600 Weak transcription HepG2 liver
3 chr9:117220400-117246600 Weak transcription Pancreatic Islets Pancreatic Islet
4 chr9:117222000-117238800 Weak transcription Fetal Muscle Trunk muscle
5 chr9:117222200-117244600 Weak transcription K562 blood
6 chr9:117222600-117246800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr9:117223200-117239200 Weak transcription Fetal Intestine Large intestine
8 chr9:117224000-117238600 Weak transcription Brain Angular Gyrus brain
9 chr9:117225000-117239400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr9:117225400-117239000 Weak transcription Colon Smooth Muscle Colon
11 chr9:117225600-117245800 Weak transcription Fetal Lung lung
12 chr9:117226400-117242600 Weak transcription Rectal Mucosa Donor 29 rectum
13 chr9:117227800-117247000 Weak transcription Duodenum Mucosa Duodenum
14 chr9:117228800-117237800 Weak transcription Thymus Thymus
15 chr9:117230400-117238600 Weak transcription Gastric stomach
16 chr9:117231600-117239000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
17 chr9:117231600-117240600 Strong transcription Brain Substantia Nigra brain
18 chr9:117232400-117238600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr9:117232400-117238600 Weak transcription Brain Inferior Temporal Lobe brain
20 chr9:117232400-117238600 Weak transcription Duodenum Smooth Muscle Duodenum
21 chr9:117232400-117239000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
22 chr9:117232600-117238600 Weak transcription Brain Hippocampus Middle brain
23 chr9:117232800-117241200 Weak transcription Ovary ovary
24 chr9:117232800-117249800 Weak transcription Adipose Nuclei Adipose
25 chr9:117234200-117244800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
26 chr9:117234400-117241600 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
27 chr9:117234600-117239000 Weak transcription Cortex derived primary cultured neurospheres brain
28 chr9:117234800-117238000 Weak transcription Fetal Stomach stomach
29 chr9:117235400-117238000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr9:117235400-117238000 Weak transcription Pancreas Pancrea
31 chr9:117235400-117239000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
32 chr9:117235400-117246000 Weak transcription Esophagus oesophagus
33 chr9:117235800-117242200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr9:117236000-117238000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr9:117236000-117247200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr9:117236600-117240800 Strong transcription Stomach Smooth Muscle stomach
37 chr9:117236600-117243200 Weak transcription Fetal Muscle Leg muscle
38 chr9:117236800-117240000 Genic enhancers Fetal Adrenal Gland Adrenal Gland
39 chr9:117236800-117240400 Strong transcription Brain Cingulate Gyrus brain
40 chr9:117236800-117241600 Enhancers Spleen Spleen
41 chr9:117237000-117238000 Enhancers Primary T cells from cord blood blood
42 chr9:117237000-117239000 Weak transcription H9 Cell Line embryonic stem cell
43 chr9:117237000-117242400 Weak transcription ES-I3 Cell Line embryonic stem cell
44 chr9:117237200-117238000 Enhancers Primary T cells fromperipheralblood blood
45 chr9:117237200-117238200 Bivalent Enhancer Primary B cells from peripheral blood blood
46 chr9:117237400-117237800 Enhancers Primary T regulatory cells fromperipheralblood blood
47 chr9:117237400-117238200 Enhancers Primary T helper naive cells fromperipheralblood blood
48 chr9:117237400-117238200 Enhancers Primary T helper cells PMA-I stimulated --
49 chr9:117237400-117238200 Enhancers Primary T helper 17 cells PMA-I stimulated --
50 chr9:117237400-117238200 Enhancers Primary T helper cells fromperipheralblood blood

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