Variant report

Variant rs1535959
Chromosome Location chr9:117248479-117248480
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:117232800-117249800 Weak transcription Adipose Nuclei Adipose
2 chr9:117239400-117249800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
3 chr9:117240000-117266600 Weak transcription Gastric stomach
4 chr9:117240400-117249800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr9:117241000-117249800 Weak transcription Brain Anterior Caudate brain
6 chr9:117241000-117255800 Weak transcription Fetal Intestine Small intestine
7 chr9:117241600-117259800 Weak transcription Thymus Thymus
8 chr9:117244000-117249800 Weak transcription Fetal Thymus thymus
9 chr9:117244200-117253600 Weak transcription Fetal Stomach stomach
10 chr9:117244400-117250800 Enhancers Fetal Adrenal Gland Adrenal Gland
11 chr9:117245000-117266600 Weak transcription Right Atrium heart
12 chr9:117245200-117249800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr9:117245200-117253800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
14 chr9:117245400-117250000 Weak transcription Colon Smooth Muscle Colon
15 chr9:117245400-117253800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
16 chr9:117245800-117249800 Weak transcription Duodenum Smooth Muscle Duodenum
17 chr9:117246000-117249000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr9:117246000-117249800 Weak transcription Brain Angular Gyrus brain
19 chr9:117246000-117249800 Weak transcription Brain Cingulate Gyrus brain
20 chr9:117246400-117249200 Enhancers Primary T helper 17 cells PMA-I stimulated --
21 chr9:117246400-117249800 Weak transcription Brain Hippocampus Middle brain
22 chr9:117246600-117249000 Weak transcription Breast Myoepithelial Primary Cells Breast
23 chr9:117246600-117249800 Weak transcription Brain Substantia Nigra brain
24 chr9:117246600-117250400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
25 chr9:117246800-117249200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr9:117246800-117250000 Enhancers HMEC breast
27 chr9:117247200-117249200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr9:117247200-117250000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr9:117247400-117248600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
30 chr9:117247400-117254000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr9:117247600-117249600 Weak transcription HSMM muscle
32 chr9:117247600-117249800 Weak transcription Primary B cells from peripheral blood blood
33 chr9:117247600-117249800 Weak transcription Primary T killer naive cells fromperipheralblood blood
34 chr9:117247600-117249800 Weak transcription NHDF-Ad bronchial
35 chr9:117247600-117250000 Weak transcription Duodenum Mucosa Duodenum
36 chr9:117247600-117250000 Weak transcription Spleen Spleen
37 chr9:117247600-117250400 Enhancers K562 blood
38 chr9:117247600-117250400 Enhancers NHEK skin
39 chr9:117247600-117256000 Weak transcription Pancreas Pancrea
40 chr9:117247600-117264400 Weak transcription Ovary ovary
41 chr9:117247600-117266400 Weak transcription Esophagus oesophagus
42 chr9:117247800-117249800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr9:117247800-117249800 Weak transcription GM12878-XiMat blood
44 chr9:117247800-117250000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr9:117247800-117250000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
46 chr9:117247800-117250000 Weak transcription Primary T helper cells fromperipheralblood blood
47 chr9:117247800-117250200 Weak transcription Stomach Smooth Muscle stomach
48 chr9:117247800-117253800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr9:117248000-117248600 Weak transcription Primary T helper cells PMA-I stimulated --
50 chr9:117248400-117248800 Weak transcription Primary T cells fromperipheralblood blood

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