Variant report
Variant | rs10016136 |
---|---|
Chromosome Location | chr4:10191699-10191700 |
allele | A/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs1001218 | 1.00[CEU][hapmap];0.81[CHB][hapmap];0.95[JPT][hapmap] |
rs10020720 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[YRI][hapmap];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs10027448 | 1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs10028570 | 0.90[ASW][hapmap];0.81[CHB][hapmap];0.89[JPT][hapmap];0.88[MEX][hapmap];0.81[MKK][hapmap] |
rs10031699 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs10033128 | 0.83[YRI][hapmap] |
rs10033143 | 0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs1017123 | 0.81[AMR][1000 genomes];0.88[ASN][1000 genomes] |
rs10489075 | 1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.91[GIH][hapmap];0.95[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs10489077 | 0.95[CHB][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];0.83[ASN][1000 genomes] |
rs10516202 | 0.86[CHB][hapmap];0.80[MEX][hapmap] |
rs10939762 | 0.80[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.93[ASN][1000 genomes] |
rs10939763 | 0.82[YRI][hapmap] |
rs10939816 | 0.84[ASN][1000 genomes] |
rs10939817 | 0.83[ASN][1000 genomes] |
rs10939820 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap];0.94[AMR][1000 genomes];0.90[EUR][1000 genomes];0.80[ASN][1000 genomes] |
rs11724141 | 0.95[CHB][hapmap];1.00[JPT][hapmap];0.80[YRI][hapmap];0.81[AMR][1000 genomes];0.84[ASN][1000 genomes] |
rs11724536 | 0.95[CHB][hapmap];0.87[CHD][hapmap];1.00[JPT][hapmap];0.87[MEX][hapmap] |
rs11724641 | 0.81[JPT][hapmap] |
rs11726425 | 0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs11727261 | 0.90[JPT][hapmap];0.82[YRI][hapmap] |
rs11728574 | 0.95[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes] |
rs11735463 | 0.94[CHB][hapmap];0.95[JPT][hapmap];0.80[ASN][1000 genomes] |
rs11945358 | 0.81[CHB][hapmap];0.80[JPT][hapmap] |
rs12505561 | 0.84[ASN][1000 genomes] |
rs12505722 | 0.95[CHB][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap];0.81[MEX][hapmap];0.85[ASN][1000 genomes] |
rs12509082 | 0.95[CHB][hapmap];1.00[JPT][hapmap] |
rs12511548 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs12640013 | 0.86[AMR][1000 genomes];0.85[ASN][1000 genomes] |
rs12642426 | 0.82[CHB][hapmap];1.00[JPT][hapmap] |
rs12642543 | 1.00[CEU][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs13114828 | 0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs13118272 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
rs13118647 | 0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs13119002 | 0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs13120791 | 0.90[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes] |
rs13125564 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
rs13126279 | 0.81[AMR][1000 genomes];0.89[ASN][1000 genomes] |
rs13126688 | 1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs13134726 | 1.00[CHB][hapmap];0.97[CHD][hapmap];0.91[GIH][hapmap];1.00[JPT][hapmap];0.93[MEX][hapmap];0.86[ASN][1000 genomes] |
rs13135578 | 1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs13147600 | 1.00[CEU][hapmap];0.81[CHB][hapmap];0.86[AMR][1000 genomes];0.80[EUR][1000 genomes] |
rs13148836 | 1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs13150639 | 0.81[AMR][1000 genomes];0.86[ASN][1000 genomes] |
rs1541520 | 0.83[ASN][1000 genomes] |
rs1541521 | 0.84[AMR][1000 genomes];0.83[ASN][1000 genomes] |
rs1541522 | 0.95[CHB][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.86[AMR][1000 genomes];0.84[ASN][1000 genomes] |
rs16895419 | 0.84[ASN][1000 genomes] |
rs16895913 | 0.83[ASN][1000 genomes] |
rs16895915 | 0.88[AMR][1000 genomes];0.84[EUR][1000 genomes];0.85[ASN][1000 genomes] |
rs1860889 | 0.84[ASN][1000 genomes] |
rs1860890 | 0.84[ASN][1000 genomes] |
rs1860892 | 0.95[CHB][hapmap];0.95[JPT][hapmap];0.80[AMR][1000 genomes];0.83[ASN][1000 genomes] |
rs1860909 | 0.81[AMR][1000 genomes];0.85[ASN][1000 genomes] |
rs1860912 | 0.95[CHB][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];0.85[ASN][1000 genomes] |
rs1860913 | 0.85[ASN][1000 genomes] |
rs1990472 | 0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes] |
rs1990473 | 0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes] |
rs2003566 | 0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs2005859 | 0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs2013714 | 0.86[ASN][1000 genomes] |
rs2024283 | 0.83[YRI][hapmap] |
rs2068466 | 0.82[CHB][hapmap];0.90[JPT][hapmap] |
rs2080071 | 0.86[ASN][1000 genomes] |
rs2080076 | 0.81[JPT][hapmap] |
rs2098229 | 0.86[ASN][1000 genomes] |
rs2110022 | 0.83[YRI][hapmap] |
rs2110023 | 0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs2110028 | 0.95[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes] |
rs2110029 | 0.95[CHB][hapmap];0.94[JPT][hapmap];0.85[ASN][1000 genomes] |
rs2159866 | 1.00[CEU][hapmap];0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs2159868 | 0.85[ASN][1000 genomes] |
rs2192087 | 1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs2192089 | 0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs2192097 | 0.81[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.91[GIH][hapmap];1.00[JPT][hapmap];0.83[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.83[YRI][hapmap];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes] |
rs2192098 | 0.85[ASN][1000 genomes] |
rs2192099 | 0.85[ASN][1000 genomes] |
rs2192100 | 1.00[CHB][hapmap];1.00[CHD][hapmap];0.91[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.87[MEX][hapmap];0.96[MKK][hapmap];0.83[YRI][hapmap];0.83[ASN][1000 genomes] |
rs2215687 | 0.95[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes] |
rs2215690 | 0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs2215692 | 0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs2215693 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
rs2241465 | 0.85[LWK][hapmap] |
rs2241466 | 1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.91[TSI][hapmap];0.80[AMR][1000 genomes] |
rs2241487 | 0.95[CHB][hapmap];1.00[JPT][hapmap];0.82[MEX][hapmap] |
rs2303401 | 0.95[CHB][hapmap];1.00[JPT][hapmap] |
rs28502741 | 0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs28600873 | 0.85[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2868419 | 1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes];0.94[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs2869214 | 0.95[CHB][hapmap];0.86[CHD][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes] |
rs3756217 | 1.00[CHB][hapmap];0.82[CHD][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap] |
rs4140695 | 1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.89[GIH][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs4235358 | 0.81[ASW][hapmap];0.90[CHB][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap];0.94[MEX][hapmap] |
rs4235359 | 0.86[ASN][1000 genomes] |
rs4406017 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.86[ASN][1000 genomes] |
rs4443281 | 0.83[YRI][hapmap] |
rs4472137 | 0.90[ASW][hapmap];0.95[CHB][hapmap];0.84[CHD][hapmap];0.95[JPT][hapmap];0.88[MEX][hapmap];0.81[MKK][hapmap] |
rs4478188 | 0.95[CHB][hapmap];1.00[JPT][hapmap];0.82[MEX][hapmap] |
rs4572881 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
rs4697718 | 0.81[JPT][hapmap] |
rs4697719 | 0.81[JPT][hapmap] |
rs4697723 | 1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.91[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.83[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs4697725 | 1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs4697733 | 1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap] |
rs4697734 | 0.95[CHB][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];0.83[ASN][1000 genomes] |
rs4697735 | 0.83[ASN][1000 genomes] |
rs4697736 | 1.00[CHB][hapmap];0.97[CHD][hapmap];0.91[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];0.87[ASN][1000 genomes] |
rs4697737 | 0.95[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.85[ASN][1000 genomes] |
rs4697738 | 0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs4697739 | 0.84[ASN][1000 genomes] |
rs4697740 | 0.86[AMR][1000 genomes];0.85[ASN][1000 genomes] |
rs4697741 | 0.80[AMR][1000 genomes];0.85[ASN][1000 genomes] |
rs4697942 | 0.81[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.91[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.92[TSI][hapmap];0.83[YRI][hapmap];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs4697943 | 0.95[CHB][hapmap];0.97[CHD][hapmap];1.00[JPT][hapmap];0.93[MEX][hapmap] |
rs4697944 | 1.00[CEU][hapmap];0.95[CHB][hapmap];0.97[CHD][hapmap];0.91[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.84[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs4697945 | 1.00[CEU][hapmap];0.95[CHB][hapmap];0.90[CHD][hapmap];0.91[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.92[TSI][hapmap];0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes] |
rs4697952 | 0.81[JPT][hapmap] |
rs4697953 | 1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.91[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs4697954 | 0.81[JPT][hapmap] |
rs4697959 | 0.95[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.80[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs4697970 | 1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.91[GIH][hapmap];0.94[JPT][hapmap];0.88[MEX][hapmap];1.00[TSI][hapmap];0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs4697976 | 0.90[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.91[GIH][hapmap];0.94[JPT][hapmap];0.94[LWK][hapmap];1.00[MEX][hapmap];0.82[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs4697979 | 0.82[AMR][1000 genomes];0.86[ASN][1000 genomes] |
rs4697980 | 0.85[AMR][1000 genomes];0.86[ASN][1000 genomes] |
rs4697982 | 0.86[ASN][1000 genomes] |
rs4697985 | 0.95[CHB][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];0.83[ASN][1000 genomes] |
rs4697987 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs4697988 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes] |
rs4697990 | 0.95[CHB][hapmap];0.88[CHD][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];0.84[ASN][1000 genomes] |
rs4697991 | 0.84[ASN][1000 genomes] |
rs4697992 | 0.83[AMR][1000 genomes];0.85[ASN][1000 genomes] |
rs4697993 | 0.84[ASN][1000 genomes] |
rs4697994 | 0.80[AMR][1000 genomes];0.84[ASN][1000 genomes] |
rs4697995 | 0.82[CEU][hapmap];0.92[JPT][hapmap];0.85[YRI][hapmap];0.83[AMR][1000 genomes];0.86[ASN][1000 genomes] |
rs4697996 | 0.85[ASN][1000 genomes] |
rs4697997 | 0.95[CHB][hapmap];0.86[CHD][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.85[ASN][1000 genomes] |
rs4698005 | 0.81[AMR][1000 genomes];0.85[ASN][1000 genomes] |
rs4698006 | 0.83[ASN][1000 genomes] |
rs4698007 | 0.83[ASN][1000 genomes] |
rs4698008 | 0.81[AMR][1000 genomes];0.85[ASN][1000 genomes] |
rs4698011 | 0.83[AMR][1000 genomes];0.83[ASN][1000 genomes] |
rs4698012 | 0.83[AMR][1000 genomes];0.83[ASN][1000 genomes] |
rs4698013 | 0.83[AMR][1000 genomes] |
rs4698016 | 0.92[AMR][1000 genomes];0.87[EUR][1000 genomes];0.80[ASN][1000 genomes] |
rs6449340 | 0.82[YRI][hapmap] |
rs6449341 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs6449395 | 0.81[AMR][1000 genomes];0.88[ASN][1000 genomes] |
rs6449414 | 0.95[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes] |
rs6449418 | 0.83[LWK][hapmap];0.84[MKK][hapmap] |
rs6449423 | 1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs6449440 | 0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.80[ASN][1000 genomes] |
rs6449441 | 0.94[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes] |
rs6810792 | 0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes] |
rs6814532 | 1.00[CHB][hapmap];0.95[CHD][hapmap];0.95[JPT][hapmap];0.88[MEX][hapmap] |
rs6816102 | 1.00[CEU][hapmap];0.95[CHB][hapmap];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs6820118 | 0.83[YRI][hapmap] |
rs6850167 | 0.95[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes] |
rs6854212 | 0.82[CEU][hapmap];0.90[JPT][hapmap] |
rs734662 | 0.84[AMR][1000 genomes];0.84[ASN][1000 genomes] |
rs737678 | 0.95[CHB][hapmap];1.00[JPT][hapmap] |
rs741075 | 0.86[ASN][1000 genomes] |
rs759020 | 0.89[ASN][1000 genomes] |
rs759032 | 0.95[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes] |
rs7670692 | 0.95[CHB][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.86[ASN][1000 genomes] |
rs7671856 | 0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs7688808 | 0.95[CHB][hapmap];0.88[CHD][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.86[ASN][1000 genomes] |
rs7689529 | 0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs7691156 | 1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.83[YRI][hapmap];0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs874079 | 0.81[JPT][hapmap] |
rs887726 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs917821 | 0.86[ASN][1000 genomes] |
rs929576 | 0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs9990427 | 1.00[CHB][hapmap];0.87[CHD][hapmap];1.00[JPT][hapmap];0.88[MEX][hapmap] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv533218 | chr4:9371016-10252290 | Active TSS Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 74 gene(s) | inside rSNPs | diseases |
2 | nsv1014216 | chr4:9713612-10223836 | Transcr. at gene 5' and 3' Genic enhancers Enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 53 gene(s) | inside rSNPs | diseases |
3 | nsv878681 | chr4:9802853-10397327 | Enhancers Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 51 gene(s) | inside rSNPs | diseases |
4 | nsv997941 | chr4:9805223-10493388 | Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 54 gene(s) | inside rSNPs | diseases |
5 | nsv1008649 | chr4:9805223-10589802 | Weak transcription Enhancers Genic enhancers Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 56 gene(s) | inside rSNPs | diseases |
6 | nsv1000587 | chr4:9805223-10610752 | Flanking Active TSS Enhancers Genic enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 56 gene(s) | inside rSNPs | diseases |
7 | nsv537022 | chr4:9805223-10610752 | Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 56 gene(s) | inside rSNPs | diseases |
8 | nsv1003454 | chr4:9805223-10710990 | Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 58 gene(s) | inside rSNPs | diseases |
9 | nsv537023 | chr4:9805223-10710990 | Weak transcription Enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 58 gene(s) | inside rSNPs | diseases |
10 | nsv1004801 | chr4:9814720-10674528 | Enhancers Strong transcription Flanking Bivalent TSS/Enh Weak transcription Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 57 gene(s) | inside rSNPs | diseases |
11 | nsv537024 | chr4:9814720-10674528 | Weak transcription Genic enhancers Enhancers Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 57 gene(s) | inside rSNPs | diseases |
12 | nsv931483 | chr4:9814721-10716463 | Strong transcription Bivalent/Poised TSS Flanking Active TSS Genic enhancers Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 58 gene(s) | inside rSNPs | diseases |
13 | nsv537026 | chr4:9903566-10262258 | Enhancers Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 48 gene(s) | inside rSNPs | diseases |
14 | nsv1009972 | chr4:9903566-10710990 | Genic enhancers Enhancers Strong transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 58 gene(s) | inside rSNPs | diseases |
15 | nsv537027 | chr4:9903566-10710990 | Flanking Active TSS ZNF genes & repeats Active TSS Weak transcription Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 58 gene(s) | inside rSNPs | diseases |
16 | esv2752052 | chr4:9911872-10313111 | Genic enhancers Weak transcription Enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 51 gene(s) | inside rSNPs | diseases |
17 | nsv1010620 | chr4:9937123-10686682 | Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 57 gene(s) | inside rSNPs | diseases |
18 | nsv530280 | chr4:9947818-10940041 | Enhancers Genic enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 66 gene(s) | inside rSNPs | diseases |
19 | nsv532706 | chr4:9948018-10451450 | Weak transcription Genic enhancers Enhancers Flanking Active TSS Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 50 gene(s) | inside rSNPs | diseases |
20 | nsv1013022 | chr4:9961220-10230042 | Active TSS Strong transcription Weak transcription Genic enhancers Enhancers Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 46 gene(s) | inside rSNPs | diseases |
21 | nsv537028 | chr4:9961220-10230042 | Weak transcription Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 46 gene(s) | inside rSNPs | diseases |
22 | nsv537029 | chr4:9961220-10262258 | Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 47 gene(s) | inside rSNPs | diseases |
23 | nsv878691 | chr4:9966477-10418078 | Enhancers Genic enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 50 gene(s) | inside rSNPs | diseases |
24 | nsv1013487 | chr4:9972011-10320963 | Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 50 gene(s) | inside rSNPs | diseases |
25 | nsv1008067 | chr4:10004664-10262258 | Enhancers Weak transcription Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 47 gene(s) | inside rSNPs | diseases |
26 | nsv537030 | chr4:10004664-10262258 | Strong transcription Enhancers Weak transcription Active TSS Genic enhancers Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 47 gene(s) | inside rSNPs | diseases |
27 | nsv869057 | chr4:10013411-10875454 | Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 65 gene(s) | inside rSNPs | diseases |
28 | nsv537031 | chr4:10040713-10262258 | Enhancers Strong transcription Flanking Active TSS Genic enhancers Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 46 gene(s) | inside rSNPs | diseases |
29 | nsv997936 | chr4:10040713-11009045 | Weak transcription Flanking Active TSS Enhancers Genic enhancers Bivalent/Poised TSS Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 65 gene(s) | inside rSNPs | diseases |
30 | nsv428438 | chr4:10058226-10273779 | Flanking Active TSS Genic enhancers Strong transcription Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 46 gene(s) | inside rSNPs | diseases |
31 | nsv537032 | chr4:10069805-10262258 | Genic enhancers Strong transcription Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 46 gene(s) | inside rSNPs | diseases |
32 | nsv537033 | chr4:10069805-10297561 | Enhancers Genic enhancers Active TSS Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 49 gene(s) | inside rSNPs | diseases |
33 | nsv1003286 | chr4:10082156-10230606 | Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription Genic enhancers Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 42 gene(s) | inside rSNPs | diseases |
34 | esv16807 | chr4:10099819-10234566 | Weak transcription Flanking Active TSS Enhancers Genic enhancers Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 42 gene(s) | inside rSNPs | diseases |
35 | nsv537034 | chr4:10103058-10262258 | Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Strong transcription Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 43 gene(s) | inside rSNPs | diseases |
36 | nsv537035 | chr4:10103058-10297561 | Transcr. at gene 5' and 3' Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 46 gene(s) | inside rSNPs | diseases |
37 | esv2752053 | chr4:10124819-10270300 | Weak transcription Flanking Active TSS Enhancers Genic enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 14 gene(s) | inside rSNPs | diseases |
38 | esv1000327 | chr4:10135604-10192545 | Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Active TSS Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 9 gene(s) | inside rSNPs | diseases |
39 | nsv593695 | chr4:10138470-10345548 | Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 16 gene(s) | inside rSNPs | diseases |
40 | nsv1010383 | chr4:10169535-10244955 | Enhancers Weak transcription Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats | TF binding regionChromatin interactive regionlncRNA | 10 gene(s) | inside rSNPs | diseases |
41 | nsv432577 | chr4:10174139-10285348 | Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Active TSS Genic enhancers | TF binding regionChromatin interactive regionlncRNA | 12 gene(s) | inside rSNPs | diseases |
42 | esv10510 | chr4:10174154-10234566 | Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Active TSS | TF binding regionChromatin interactive regionlncRNA | 10 gene(s) | inside rSNPs | diseases |
43 | nsv998973 | chr4:10178168-10236142 | Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Active TSS ZNF genes & repeats Genic enhancers | TF binding regionChromatin interactive regionlncRNA | 9 gene(s) | inside rSNPs | diseases |
44 | nsv508274 | chr4:10179291-10239403 | Enhancers Weak transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer ZNF genes & repeats | TF binding regionChromatin interactive regionlncRNA | 9 gene(s) | inside rSNPs | diseases |
45 | nsv1004492 | chr4:10182845-10200718 | Flanking Active TSS Enhancers Weak transcription Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer | Chromatin interactive region | 7 gene(s) | inside rSNPs | diseases |
46 | nsv1000149 | chr4:10183420-10231486 | Enhancers Genic enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Active TSS Transcr. at gene 5' and 3' | TF binding regionChromatin interactive regionlncRNA | 8 gene(s) | inside rSNPs | diseases |
47 | esv1817634 | chr4:10186760-10246264 | Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Genic enhancers Transcr. at gene 5' and 3' | TF binding regionChromatin interactive regionlncRNA | 5 gene(s) | inside rSNPs | diseases |
48 | esv1811222 | chr4:10191040-10235231 | Genic enhancers Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS | TF binding regionChromatin interactive regionlncRNA | 4 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr4:10184000-10194200 | Weak transcription | HMEC | breast |
2 | chr4:10187400-10191800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
3 | chr4:10188800-10194000 | Weak transcription | Fetal Heart | heart |
4 | chr4:10190400-10192200 | Genic enhancers | K562 | blood |