The 2.0 version of rSNPBase

Variant report

Variant rs10020561
Chromosome Location chr4:6953474-6953475
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:6928000-6969600 Weak transcription Aorta Aorta
2 chr4:6943800-6955400 Weak transcription Brain Substantia Nigra brain
3 chr4:6944800-6955400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
4 chr4:6945000-6955400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr4:6945000-6970200 Weak transcription Hela-S3 cervix
6 chr4:6945200-6955600 Weak transcription Fetal Brain Female brain
7 chr4:6945400-6953600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr4:6945400-6955400 Weak transcription Fetal Stomach stomach
9 chr4:6945600-6953600 Weak transcription GM12878-XiMat blood
10 chr4:6945600-6955600 Weak transcription Left Ventricle heart
11 chr4:6945800-6953600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr4:6945800-6965800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr4:6946400-6955400 Weak transcription NHLF lung
14 chr4:6946600-6955200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr4:6946600-6955400 Weak transcription Stomach Smooth Muscle stomach
16 chr4:6946600-6955800 Weak transcription Fetal Brain Male brain
17 chr4:6946600-6969000 Weak transcription Dnd41 blood
18 chr4:6946800-6953600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr4:6946800-6953600 Weak transcription Brain Hippocampus Middle brain
20 chr4:6946800-6953600 Weak transcription Brain Inferior Temporal Lobe brain
21 chr4:6946800-6954000 Weak transcription Primary B cells from cord blood blood
22 chr4:6946800-6955400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
23 chr4:6946800-6955400 Weak transcription Stomach Mucosa stomach
24 chr4:6946800-6955400 Weak transcription NHDF-Ad bronchial
25 chr4:6947000-6953600 Weak transcription Primary monocytes fromperipheralblood blood
26 chr4:6947000-6953600 Weak transcription Fetal Thymus thymus
27 chr4:6947000-6953600 Weak transcription Skeletal Muscle Female skeletal muscle
28 chr4:6947000-6953600 Weak transcription Monocytes-CD14+_RO01746 blood
29 chr4:6947000-6953800 Weak transcription HUES48 Cell Line embryonic stem cell
30 chr4:6947000-6953800 Weak transcription Placenta Placenta
31 chr4:6947000-6954000 Weak transcription Spleen Spleen
32 chr4:6947000-6955400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr4:6947000-6955600 Weak transcription Placenta Amnion Placenta Amnion
34 chr4:6947200-6953600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
35 chr4:6947200-6955400 Weak transcription Skeletal Muscle Male skeletal muscle
36 chr4:6947800-6953600 Weak transcription HUES6 Cell Line embryonic stem cell
37 chr4:6948600-6962400 Weak transcription Primary neutrophils fromperipheralblood blood
38 chr4:6949800-6955800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
39 chr4:6950000-6955400 Weak transcription Fetal Adrenal Gland Adrenal Gland
40 chr4:6950200-6953600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
41 chr4:6950200-6953600 Weak transcription Gastric stomach
42 chr4:6950200-6956600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr4:6950400-6953600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
44 chr4:6950400-6953600 Weak transcription Duodenum Mucosa Duodenum
45 chr4:6950400-6955400 Weak transcription Liver Liver
46 chr4:6950400-6955400 Weak transcription Colonic Mucosa Colon
47 chr4:6950400-6955400 Weak transcription Fetal Lung lung
48 chr4:6950400-6955400 Weak transcription Rectal Mucosa Donor 31 rectum
49 chr4:6950400-6955400 Weak transcription HepG2 liver
50 chr4:6950400-6955600 Weak transcription Pancreas Pancrea

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Last update: Aug 31, 2015