Variant report

Variant rs1002996
Chromosome Location chr6:57022596-57022597
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:56968200-57036400 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr6:56985600-57036800 Weak transcription Pancreas Pancrea
3 chr6:56991600-57036600 Weak transcription Small Intestine intestine
4 chr6:56995800-57036600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr6:56996000-57036800 Weak transcription Gastric stomach
6 chr6:56996200-57036600 Weak transcription Fetal Brain Male brain
7 chr6:56996400-57036600 Weak transcription iPS-15b Cell Line embryonic stem cell
8 chr6:56998800-57027400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr6:56999800-57036600 Weak transcription Rectal Smooth Muscle rectum
10 chr6:57001200-57036600 Weak transcription ES-WA7 Cell Line embryonic stem cell
11 chr6:57002600-57036600 Weak transcription A549 lung
12 chr6:57005600-57023400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr6:57005600-57023800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr6:57006200-57028600 Strong transcription Liver Liver
15 chr6:57006600-57036600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
16 chr6:57010800-57024600 Strong transcription Primary B cells from cord blood blood
17 chr6:57011400-57036600 Weak transcription Stomach Mucosa stomach
18 chr6:57011800-57023000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr6:57012400-57036800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
20 chr6:57012800-57036400 Weak transcription Primary T killer naive cells fromperipheralblood blood
21 chr6:57012800-57036600 Weak transcription ES-I3 Cell Line embryonic stem cell
22 chr6:57013000-57029000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
23 chr6:57013200-57036600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
24 chr6:57013400-57023800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr6:57013400-57027000 Weak transcription Hela-S3 cervix
26 chr6:57013400-57027200 Weak transcription NHLF lung
27 chr6:57013600-57036000 Weak transcription Fetal Heart heart
28 chr6:57014600-57029000 Weak transcription Fetal Kidney kidney
29 chr6:57015200-57024000 Strong transcription Monocytes-CD14+_RO01746 blood
30 chr6:57015200-57024400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
31 chr6:57015400-57024000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr6:57015800-57028200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr6:57016000-57036600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
34 chr6:57018000-57029400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
35 chr6:57018200-57022800 Strong transcription NHDF-Ad bronchial
36 chr6:57018400-57027200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
37 chr6:57018800-57036400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
38 chr6:57019000-57023000 Weak transcription NHEK skin
39 chr6:57019000-57026200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr6:57019000-57027400 Weak transcription Spleen Spleen
41 chr6:57019000-57029400 Weak transcription Brain Angular Gyrus brain
42 chr6:57019000-57030000 Weak transcription Brain Hippocampus Middle brain
43 chr6:57019000-57036400 Weak transcription Fetal Stomach stomach
44 chr6:57019000-57036400 Weak transcription Lung lung
45 chr6:57019000-57036600 Weak transcription H9 Cell Line embryonic stem cell
46 chr6:57019000-57036600 Weak transcription Aorta Aorta
47 chr6:57019000-57036600 Weak transcription Sigmoid Colon Sigmoid Colon
48 chr6:57019000-57036800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
49 chr6:57019200-57027400 Weak transcription Cortex derived primary cultured neurospheres brain
50 chr6:57019200-57028400 Weak transcription Fetal Intestine Large intestine

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