Variant report

Variant rs9357940
Chromosome Location chr6:57059820-57059821
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:57038000-57081600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr6:57038200-57063800 Weak transcription Esophagus oesophagus
3 chr6:57038200-57063800 Weak transcription Gastric stomach
4 chr6:57038400-57072800 Weak transcription Pancreas Pancrea
5 chr6:57038400-57079600 Weak transcription Fetal Brain Female brain
6 chr6:57038600-57064000 Weak transcription Placenta Amnion Placenta Amnion
7 chr6:57038800-57060400 Weak transcription Brain Inferior Temporal Lobe brain
8 chr6:57039000-57086000 Weak transcription Thymus Thymus
9 chr6:57039600-57064000 Weak transcription Rectal Mucosa Donor 29 rectum
10 chr6:57042200-57064000 Weak transcription Colonic Mucosa Colon
11 chr6:57042800-57060400 Weak transcription Right Ventricle heart
12 chr6:57043800-57063800 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr6:57048200-57064200 Weak transcription H9 Cell Line embryonic stem cell
14 chr6:57048200-57072200 Weak transcription Fetal Brain Male brain
15 chr6:57048400-57067200 Weak transcription Breast Myoepithelial Primary Cells Breast
16 chr6:57048400-57067200 Weak transcription Primary hematopoietic stem cells blood
17 chr6:57048800-57060400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
18 chr6:57048800-57063800 Weak transcription Sigmoid Colon Sigmoid Colon
19 chr6:57049000-57072600 Weak transcription Psoas Muscle Psoas
20 chr6:57049400-57063600 Weak transcription Brain Anterior Caudate brain
21 chr6:57049400-57063800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr6:57049400-57063800 Weak transcription Lung lung
23 chr6:57049400-57085000 Weak transcription Aorta Aorta
24 chr6:57050800-57072600 Weak transcription Skeletal Muscle Female skeletal muscle
25 chr6:57051000-57060200 Weak transcription Ovary ovary
26 chr6:57051000-57063800 Weak transcription Left Ventricle heart
27 chr6:57053600-57060600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr6:57054400-57063800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
29 chr6:57054400-57067000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr6:57055600-57062600 Strong transcription HSMM muscle
31 chr6:57055600-57063600 Weak transcription HepG2 liver
32 chr6:57055600-57063800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr6:57056200-57063800 Weak transcription A549 lung
34 chr6:57056600-57086000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
35 chr6:57056800-57062400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr6:57056800-57063800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr6:57056800-57064000 Weak transcription HSMMtube muscle
38 chr6:57057000-57067800 Weak transcription Cortex derived primary cultured neurospheres brain
39 chr6:57057200-57063800 Weak transcription NHLF lung
40 chr6:57057200-57065200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
41 chr6:57057200-57067000 Weak transcription Fetal Kidney kidney
42 chr6:57057200-57081200 Weak transcription HMEC breast
43 chr6:57057600-57062600 Weak transcription Fetal Stomach stomach
44 chr6:57057600-57063800 Weak transcription H1 Cell Line embryonic stem cell
45 chr6:57057600-57063800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
46 chr6:57057600-57081200 Weak transcription Fetal Intestine Small intestine
47 chr6:57057800-57071400 Weak transcription Fetal Thymus thymus
48 chr6:57058000-57060200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
49 chr6:57058000-57060400 Weak transcription Stomach Smooth Muscle stomach
50 chr6:57058000-57063600 Weak transcription Duodenum Smooth Muscle Duodenum

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