Variant report

Variant	rs10042470
Chromosome Location	chr5:36419070-36419071
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr5:36411883..36414193-chr5:36418548..36420593,2	MCF-7	breast:
2	chr5:36416985..36419149-chr5:36442977..36445580,2	K562	blood:
3	chr5:36415500..36419149-chr5:36442914..36446558,5	K562	blood:

rs_ID	r²[population]
rs10050988	1.00[EUR][1000 genomes]
rs10213853	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13358189	1.00[EUR][1000 genomes]
rs13359855	1.00[EUR][1000 genomes]
rs16903117	1.00[EUR][1000 genomes]
rs28469511	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28564846	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58474198	1.00[EUR][1000 genomes]
rs6875408	1.00[EUR][1000 genomes]
rs73748605	1.00[EUR][1000 genomes]
rs7704701	1.00[EUR][1000 genomes]

Chromatin state (count:32 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:36415200-36419200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
2	chr5:36415600-36422600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
3	chr5:36415600-36423000	Weak transcription	Fetal Kidney	kidney
4	chr5:36415600-36423200	Weak transcription	Brain Anterior Caudate	brain
5	chr5:36416200-36420400	Enhancers	K562	blood
6	chr5:36416600-36420000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
7	chr5:36416800-36419800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr5:36416800-36419800	Enhancers	NHEK	skin
9	chr5:36416800-36423600	Weak transcription	Fetal Muscle Leg	muscle
10	chr5:36417000-36419200	Enhancers	HMEC	breast
11	chr5:36417000-36420200	Enhancers	Stomach Mucosa	stomach
12	chr5:36417200-36419600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
13	chr5:36417200-36420200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
14	chr5:36417400-36419200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
15	chr5:36417400-36420400	Enhancers	Fetal Intestine Small	intestine
16	chr5:36417600-36419800	Weak transcription	Cortex derived primary cultured neurospheres	brain
17	chr5:36417600-36419800	Enhancers	Fetal Intestine Large	intestine
18	chr5:36417800-36419200	Enhancers	Placenta	Placenta
19	chr5:36418200-36419200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
20	chr5:36418200-36420200	Bivalent Enhancer	H1 Cell Line	embryonic stem cell
21	chr5:36418200-36420200	Enhancers	Duodenum Mucosa	Duodenum
22	chr5:36418600-36419600	Weak transcription	Small Intestine	intestine
23	chr5:36418600-36420000	Enhancers	Liver	Liver
24	chr5:36418600-36420200	Bivalent Enhancer	HUES6 Cell Line	embryonic stem cell
25	chr5:36418600-36420200	Bivalent Enhancer	iPS-20b Cell Line	embryonic stem cell
26	chr5:36418800-36420200	Enhancers	Hela-S3	cervix
27	chr5:36418800-36422400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
28	chr5:36418800-36423000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
29	chr5:36419000-36419800	Enhancers	Primary T cells fromperipheralblood	blood
30	chr5:36419000-36419800	Enhancers	Esophagus	oesophagus
31	chr5:36419000-36422800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
32	chr5:36419000-36423000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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