Variant report

Variant	rs10050910
Chromosome Location	chr5:71039504-71039505
allele	A/C/G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10040641	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10054690	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs10063728	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1106471	0.94[CEU][hapmap];1.00[CHB][hapmap];0.82[JPT][hapmap];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1183135	0.98[ASN][1000 genomes]
rs35587462	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3857389	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3903314	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4703672	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4704211	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs4704226	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs61189548	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6453135	0.89[AFR][1000 genomes];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs6453136	0.91[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6453137	0.90[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs6887612	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6887801	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6895325	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:71037800-71040800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
2	chr5:71038400-71040000	Enhancers	Fetal Lung	lung
3	chr5:71039000-71039600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr5:71039000-71039600	Flanking Active TSS	Duodenum Smooth Muscle	Duodenum
5	chr5:71039000-71039600	Enhancers	Rectal Smooth Muscle	rectum
6	chr5:71039000-71040000	Enhancers	Rectal Mucosa Donor 31	rectum
7	chr5:71039000-71040400	Enhancers	Fetal Intestine Small	intestine
8	chr5:71039000-71040400	Enhancers	Lung	lung
9	chr5:71039000-71040600	Enhancers	Small Intestine	intestine
10	chr5:71039000-71040600	Enhancers	Stomach Mucosa	stomach
11	chr5:71039000-71040800	Enhancers	Duodenum Mucosa	Duodenum
12	chr5:71039000-71040800	Enhancers	HepG2	liver
13	chr5:71039200-71039600	Flanking Active TSS	Colon Smooth Muscle	Colon
14	chr5:71039200-71040200	Enhancers	Fetal Stomach	stomach
15	chr5:71039200-71040400	Enhancers	Gastric	stomach
16	chr5:71039200-71040400	Enhancers	Ovary	ovary
17	chr5:71039200-71040400	Enhancers	Stomach Smooth Muscle	stomach
18	chr5:71039400-71040400	Enhancers	Sigmoid Colon	Sigmoid Colon

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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