The 2.0 version of rSNPBase

Variant report

Variant rs10058453
Chromosome Location chr5:35880820-35880821
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:36 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:35860400-35883800 Weak transcription Small Intestine intestine
2 chr5:35866600-35882000 Genic enhancers Dnd41 blood
3 chr5:35875400-35883200 Genic enhancers Fetal Thymus thymus
4 chr5:35876600-35884600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
5 chr5:35876800-35883600 Weak transcription Osteobl bone
6 chr5:35877400-35883600 Weak transcription Muscle Satellite Cultured Cells --
7 chr5:35877600-35883200 Weak transcription NHEK skin
8 chr5:35877800-35881000 Strong transcription Primary T helper 17 cells PMA-I stimulated --
9 chr5:35878000-35881000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
10 chr5:35878000-35882000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr5:35878000-35882000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr5:35878000-35882200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
13 chr5:35878200-35883600 Weak transcription HSMM muscle
14 chr5:35878400-35882600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
15 chr5:35879000-35881800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
16 chr5:35879800-35881000 Enhancers Primary monocytes fromperipheralblood blood
17 chr5:35879800-35883200 Weak transcription NHLF lung
18 chr5:35879800-35883800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
19 chr5:35879800-35885000 Enhancers Primary T helper naive cells fromperipheralblood blood
20 chr5:35880000-35881000 Enhancers Monocytes-CD14+_RO01746 blood
21 chr5:35880000-35881400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
22 chr5:35880000-35882600 Weak transcription Primary T helper cells fromperipheralblood blood
23 chr5:35880000-35882600 Weak transcription Primary T killer memory cells from peripheral blood blood
24 chr5:35880200-35883400 Weak transcription Primary hematopoietic stem cells blood
25 chr5:35880200-35885000 Enhancers Thymus Thymus
26 chr5:35880400-35882200 Weak transcription Primary T regulatory cells fromperipheralblood blood
27 chr5:35880400-35884400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
28 chr5:35880600-35881800 Weak transcription Primary T helper cells PMA-I stimulated --
29 chr5:35880600-35883200 Weak transcription Primary T killer naive cells fromperipheralblood blood
30 chr5:35880600-35883200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr5:35880600-35883400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr5:35880800-35881000 Enhancers Primary T helper naive cells from peripheral blood blood
33 chr5:35880800-35882000 Weak transcription Hela-S3 cervix
34 chr5:35880800-35882600 Weak transcription Primary T cells fromperipheralblood blood
35 chr5:35880800-35882800 Weak transcription Primary hematopoietic stem cells short term culture blood
36 chr5:35880800-35883600 Weak transcription Primary T cells from cord blood blood

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Last update: Aug 31, 2015