The 2.0 version of rSNPBase

Variant report

Variant rs7701111
Chromosome Location chr5:35865211-35865212
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:36 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:35857400-35869200 Transcr. at gene 5' and 3' Primary T helper cells PMA-I stimulated --
2 chr5:35857800-35866600 Transcr. at gene 5' and 3' Dnd41 blood
3 chr5:35858800-35865400 Transcr. at gene 5' and 3' Primary T helper memory cells from peripheral blood 1 blood
4 chr5:35858800-35866600 Transcr. at gene 5' and 3' Primary T cells fromperipheralblood blood
5 chr5:35860000-35869000 Weak transcription HMEC breast
6 chr5:35860000-35876600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr5:35860400-35872800 Weak transcription Spleen Spleen
8 chr5:35860400-35883800 Weak transcription Small Intestine intestine
9 chr5:35861200-35870400 Weak transcription Rectal Mucosa Donor 29 rectum
10 chr5:35862400-35870400 Weak transcription Duodenum Mucosa Duodenum
11 chr5:35862600-35868200 Strong transcription Fetal Thymus thymus
12 chr5:35862600-35868600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr5:35862600-35876200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
14 chr5:35863600-35868800 Weak transcription Lung lung
15 chr5:35863800-35868400 Weak transcription HSMM muscle
16 chr5:35863800-35868800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr5:35863800-35869000 Weak transcription GM12878-XiMat blood
18 chr5:35863800-35876200 Weak transcription NHDF-Ad bronchial
19 chr5:35864200-35867800 Weak transcription NHLF lung
20 chr5:35864200-35869600 Weak transcription Primary B cells from cord blood blood
21 chr5:35864600-35876600 Weak transcription Muscle Satellite Cultured Cells --
22 chr5:35864800-35865600 Genic enhancers Primary T helper memory cells from peripheral blood 2 blood
23 chr5:35864800-35865600 Strong transcription Primary T helper 17 cells PMA-I stimulated --
24 chr5:35864800-35865600 Weak transcription Thymus Thymus
25 chr5:35864800-35865800 Strong transcription Primary T killer naive cells fromperipheralblood blood
26 chr5:35864800-35866000 Active TSS Primary T cells from cord blood blood
27 chr5:35864800-35866000 Strong transcription Primary T helper naive cells from peripheral blood blood
28 chr5:35864800-35867200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr5:35864800-35867600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
30 chr5:35864800-35867600 Weak transcription Osteobl bone
31 chr5:35865000-35866000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
32 chr5:35865000-35866400 Genic enhancers Primary T helper naive cells fromperipheralblood blood
33 chr5:35865000-35867000 Strong transcription Primary T regulatory cells fromperipheralblood blood
34 chr5:35865200-35865600 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
35 chr5:35865200-35865600 Active TSS Primary T killer memory cells from peripheral blood blood
36 chr5:35865200-35866000 Weak transcription Primary T helper cells fromperipheralblood blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015