Variant report

Variant rs10062926
Chromosome Location chr5:145235960-145235961
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:145231400-145236000 Enhancers Fetal Intestine Small intestine
2 chr5:145233800-145236400 Enhancers Stomach Mucosa stomach
3 chr5:145234000-145236000 Enhancers HMEC breast
4 chr5:145234000-145236400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr5:145234000-145236400 Enhancers Small Intestine intestine
6 chr5:145234200-145236200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr5:145234400-145236000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
8 chr5:145234400-145236400 Enhancers Gastric stomach
9 chr5:145234600-145236000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr5:145235000-145236400 Enhancers K562 blood
11 chr5:145235400-145236000 Flanking Active TSS HUES6 Cell Line embryonic stem cell
12 chr5:145235400-145236000 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
13 chr5:145235400-145236000 Flanking Active TSS Brain Substantia Nigra brain
14 chr5:145235400-145236000 Flanking Active TSS Colon Smooth Muscle Colon
15 chr5:145235400-145236200 Flanking Active TSS Rectal Mucosa Donor 29 rectum
16 chr5:145235400-145236200 Active TSS Skeletal Muscle Male skeletal muscle
17 chr5:145235400-145236400 Active TSS iPS-15b Cell Line embryonic stem cell
18 chr5:145235400-145236400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr5:145235400-145236400 Enhancers Fetal Brain Male brain
20 chr5:145235400-145236800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr5:145235600-145236000 Flanking Active TSS H1 Cell Line embryonic stem cell
22 chr5:145235600-145236000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr5:145235600-145236000 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
24 chr5:145235600-145236000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
25 chr5:145235600-145236000 Flanking Active TSS Brain Cingulate Gyrus brain
26 chr5:145235600-145236000 Flanking Active TSS Fetal Heart heart
27 chr5:145235600-145236000 Flanking Active TSS Rectal Smooth Muscle rectum
28 chr5:145235600-145236000 Active TSS Right Ventricle heart
29 chr5:145235600-145236000 Enhancers Spleen Spleen
30 chr5:145235600-145236000 Enhancers HSMMtube muscle
31 chr5:145235600-145236200 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr5:145235600-145236200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
33 chr5:145235600-145236200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
34 chr5:145235600-145236200 Enhancers Sigmoid Colon Sigmoid Colon
35 chr5:145235600-145236200 Enhancers HSMM muscle
36 chr5:145235600-145236400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr5:145235600-145236400 Bivalent/Poised TSS H9 Derived Neuron Cultured Cells ES cell derived
38 chr5:145235600-145236400 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
39 chr5:145235600-145236400 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr5:145235600-145236400 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr5:145235600-145236400 Flanking Active TSS Primary hematopoietic stem cells blood
42 chr5:145235600-145236400 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
43 chr5:145235600-145236400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr5:145235600-145236400 Enhancers Cortex derived primary cultured neurospheres brain
45 chr5:145235600-145236400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr5:145235600-145236400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr5:145235600-145236400 Flanking Active TSS Adipose Nuclei Adipose
48 chr5:145235600-145236400 Active TSS Brain Inferior Temporal Lobe brain
49 chr5:145235600-145236400 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
50 chr5:145235600-145236400 Flanking Active TSS Rectal Mucosa Donor 31 rectum

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