Variant report

Variant	rs10067242
Chromosome Location	chr5:41142573-41142574
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs10045129	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10045132	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10052999	0.84[AFR][1000 genomes]
rs10060627	0.82[AFR][1000 genomes];0.83[ASN][1000 genomes]
rs10473234	1.00[ASN][1000 genomes]
rs12188046	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12332614	0.83[ASN][1000 genomes]
rs6868654	0.83[ASN][1000 genomes]
rs9292804	1.00[ASN][1000 genomes]
rs9654381	1.00[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:41139600-41147400	Weak transcription	Fetal Intestine Large	intestine
2	chr5:41139800-41182000	Weak transcription	Left Ventricle	heart
3	chr5:41140200-41151800	Weak transcription	Pancreas	Pancrea
4	chr5:41141200-41147800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr5:41141600-41156400	Strong transcription	Liver	Liver
6	chr5:41142200-41150600	Weak transcription	Adipose Nuclei	Adipose

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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