The 2.0 version of rSNPBase

Variant report

Variant rs10069181
Chromosome Location chr5:178375885-178375886
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:178368800-178377000 Weak transcription Psoas Muscle Psoas
2 chr5:178369000-178378400 Weak transcription NHDF-Ad bronchial
3 chr5:178369000-178378800 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
4 chr5:178369000-178380200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr5:178369000-178384800 ZNF genes & repeats Fetal Stomach stomach
6 chr5:178369400-178418200 ZNF genes & repeats Fetal Brain Female brain
7 chr5:178369600-178377400 Strong transcription Fetal Muscle Trunk muscle
8 chr5:178370000-178376200 Weak transcription Placenta Placenta
9 chr5:178370000-178378400 Weak transcription Muscle Satellite Cultured Cells --
10 chr5:178371000-178376000 Strong transcription Fetal Muscle Leg muscle
11 chr5:178371000-178376000 Strong transcription Placenta Amnion Placenta Amnion
12 chr5:178371200-178379200 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
13 chr5:178371800-178378000 ZNF genes & repeats Fetal Intestine Small intestine
14 chr5:178372400-178376400 ZNF genes & repeats Pancreas Pancrea
15 chr5:178372600-178377400 Weak transcription Fetal Heart heart
16 chr5:178373200-178385800 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr5:178373400-178376200 Strong transcription Fetal Adrenal Gland Adrenal Gland
18 chr5:178373600-178377200 Strong transcription Brain Germinal Matrix brain
19 chr5:178374400-178376000 Strong transcription Cortex derived primary cultured neurospheres brain
20 chr5:178374400-178376000 Weak transcription Fetal Intestine Large intestine
21 chr5:178374600-178376600 Weak transcription Colon Smooth Muscle Colon
22 chr5:178374600-178376800 Weak transcription Brain Substantia Nigra brain
23 chr5:178374600-178380400 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr5:178374800-178376800 Weak transcription Stomach Smooth Muscle stomach
25 chr5:178374800-178377000 Weak transcription Brain Hippocampus Middle brain
26 chr5:178374800-178377200 Weak transcription Brain Cingulate Gyrus brain
27 chr5:178374800-178378600 Weak transcription Rectal Mucosa Donor 29 rectum
28 chr5:178374800-178380000 Weak transcription Brain Angular Gyrus brain
29 chr5:178375600-178376400 Strong transcription Pancreatic Islets Pancreatic Islet
30 chr5:178375600-178376800 Weak transcription Duodenum Smooth Muscle Duodenum
31 chr5:178375600-178377000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr5:178375600-178377000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
33 chr5:178375600-178377000 Weak transcription Fetal Brain Male brain
34 chr5:178375600-178377200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr5:178375600-178378400 Weak transcription Brain Anterior Caudate brain
36 chr5:178375600-178381600 Weak transcription Right Ventricle heart
37 chr5:178375600-178381800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr5:178375600-178385800 Weak transcription Osteobl bone
39 chr5:178375800-178377000 Weak transcription Brain Inferior Temporal Lobe brain
40 chr5:178375800-178377000 Weak transcription Fetal Kidney kidney
41 chr5:178375800-178377000 Weak transcription Fetal Lung lung
42 chr5:178375800-178377000 Weak transcription Ovary ovary
43 chr5:178375800-178377200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
44 chr5:178375800-178377200 Weak transcription Left Ventricle heart
45 chr5:178375800-178379800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
46 chr5:178375800-178381800 Weak transcription Rectal Smooth Muscle rectum

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015