Variant report

Variant rs9329060
Chromosome Location chr5:178381057-178381058
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:178369000-178384800 ZNF genes & repeats Fetal Stomach stomach
2 chr5:178369400-178418200 ZNF genes & repeats Fetal Brain Female brain
3 chr5:178373200-178385800 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr5:178375600-178381600 Weak transcription Right Ventricle heart
5 chr5:178375600-178381800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
6 chr5:178375600-178385800 Weak transcription Osteobl bone
7 chr5:178375800-178381800 Weak transcription Rectal Smooth Muscle rectum
8 chr5:178376800-178383400 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
9 chr5:178376800-178383600 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
10 chr5:178377000-178383600 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr5:178378000-178383400 ZNF genes & repeats Adipose Nuclei Adipose
12 chr5:178379000-178381800 Weak transcription Placenta Amnion Placenta Amnion
13 chr5:178379000-178387400 ZNF genes & repeats Ovary ovary
14 chr5:178379800-178382400 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
15 chr5:178379800-178383400 ZNF genes & repeats Fetal Lung lung
16 chr5:178380000-178382400 ZNF genes & repeats Liver Liver
17 chr5:178380000-178383000 ZNF genes & repeats Brain Hippocampus Middle brain
18 chr5:178380000-178383000 ZNF genes & repeats Brain Inferior Temporal Lobe brain
19 chr5:178380000-178383800 ZNF genes & repeats Fetal Muscle Leg muscle
20 chr5:178380000-178393600 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
21 chr5:178380200-178383400 ZNF genes & repeats Brain Germinal Matrix brain
22 chr5:178380400-178382400 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
23 chr5:178380400-178383000 ZNF genes & repeats Pancreas Pancrea
24 chr5:178380400-178383600 ZNF genes & repeats Fetal Muscle Trunk muscle
25 chr5:178380600-178381400 Weak transcription Fetal Kidney kidney
26 chr5:178380600-178381600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr5:178380600-178381600 Weak transcription Brain Substantia Nigra brain
28 chr5:178380600-178381600 Weak transcription Left Ventricle heart
29 chr5:178380600-178383400 Weak transcription Fetal Intestine Large intestine
30 chr5:178380800-178381400 Strong transcription Cortex derived primary cultured neurospheres brain
31 chr5:178380800-178381600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr5:178380800-178381600 Weak transcription Colon Smooth Muscle Colon
33 chr5:178380800-178381600 Weak transcription Fetal Brain Male brain
34 chr5:178380800-178381600 Weak transcription Skeletal Muscle Female skeletal muscle
35 chr5:178380800-178381600 Weak transcription Stomach Smooth Muscle stomach
36 chr5:178380800-178381800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
37 chr5:178380800-178381800 Weak transcription Fetal Heart heart
38 chr5:178380800-178384800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr5:178381000-178381400 Weak transcription Brain Cingulate Gyrus brain
40 chr5:178381000-178383600 ZNF genes & repeats Fetal Intestine Small intestine
41 chr5:178381000-178384800 ZNF genes & repeats Aorta Aorta

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