The 2.0 version of rSNPBase

Variant report

Variant rs10071283
Chromosome Location chr5:145194542-145194543
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:145158400-145196400 Weak transcription Primary hematopoietic stem cells short term culture blood
2 chr5:145158400-145207000 Weak transcription Esophagus oesophagus
3 chr5:145162800-145198200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr5:145162800-145212800 Weak transcription Rectal Smooth Muscle rectum
5 chr5:145167400-145200600 Weak transcription Fetal Adrenal Gland Adrenal Gland
6 chr5:145167800-145194800 Weak transcription Fetal Lung lung
7 chr5:145168000-145203600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
8 chr5:145170200-145195400 Weak transcription HepG2 liver
9 chr5:145170600-145213400 Weak transcription Placenta Amnion Placenta Amnion
10 chr5:145172800-145196200 Weak transcription Skeletal Muscle Female skeletal muscle
11 chr5:145172800-145214200 Weak transcription Right Ventricle heart
12 chr5:145174200-145209200 Weak transcription Colon Smooth Muscle Colon
13 chr5:145175200-145205000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr5:145177200-145206800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr5:145177200-145209000 Weak transcription Muscle Satellite Cultured Cells --
16 chr5:145177200-145209200 Weak transcription NH-A brain
17 chr5:145177400-145209000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
18 chr5:145179200-145207000 Weak transcription Pancreas Pancrea
19 chr5:145179400-145209400 Weak transcription Stomach Mucosa stomach
20 chr5:145182800-145207000 Weak transcription Small Intestine intestine
21 chr5:145183400-145197200 Weak transcription HMEC breast
22 chr5:145183600-145197400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr5:145183600-145214000 Weak transcription Fetal Kidney kidney
24 chr5:145183800-145195200 Weak transcription Monocytes-CD14+_RO01746 blood
25 chr5:145185600-145194600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr5:145185800-145202400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
27 chr5:145187000-145209200 Weak transcription A549 lung
28 chr5:145187400-145197200 Weak transcription Aorta Aorta
29 chr5:145188400-145194600 Weak transcription Primary hematopoietic stem cells blood
30 chr5:145189200-145200000 Weak transcription Osteobl bone
31 chr5:145189600-145194800 Strong transcription Sigmoid Colon Sigmoid Colon
32 chr5:145190200-145196600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr5:145191600-145199600 Weak transcription Fetal Muscle Leg muscle
34 chr5:145191600-145206400 Weak transcription Liver Liver
35 chr5:145191800-145194800 Weak transcription Ovary ovary
36 chr5:145191800-145196000 Weak transcription K562 blood
37 chr5:145191800-145199800 Weak transcription HUVEC blood vessel
38 chr5:145192000-145196400 Weak transcription iPS-20b Cell Line embryonic stem cell
39 chr5:145192000-145203600 Weak transcription Adipose Nuclei Adipose
40 chr5:145192400-145203600 Weak transcription Left Ventricle heart
41 chr5:145192800-145200600 Weak transcription Lung lung
42 chr5:145192800-145209200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
43 chr5:145193000-145204000 Weak transcription Spleen Spleen
44 chr5:145193200-145197400 Weak transcription Fetal Heart heart
45 chr5:145193800-145201400 Strong transcription Rectal Mucosa Donor 31 rectum
46 chr5:145193800-145202000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr5:145194000-145196800 Strong transcription Fetal Stomach stomach
48 chr5:145194000-145197000 Strong transcription Fetal Intestine Small intestine
49 chr5:145194000-145199600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
50 chr5:145194000-145201000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --

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Last update: Aug 31, 2015