Variant report

Variant	rs10072344
Chromosome Location	chr5:94684119-94684120
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs17084595	1.00[EUR][1000 genomes]
rs17084604	0.85[YRI][hapmap];1.00[EUR][1000 genomes]
rs17084611	1.00[EUR][1000 genomes]
rs2560266	0.84[YRI][hapmap]
rs2731824	0.84[YRI][hapmap]
rs56903600	1.00[EUR][1000 genomes]
rs57134395	1.00[EUR][1000 genomes]
rs57371920	1.00[EUR][1000 genomes]
rs59340203	1.00[EUR][1000 genomes]
rs60330559	1.00[EUR][1000 genomes]
rs60791043	1.00[EUR][1000 genomes]
rs6882948	0.85[YRI][hapmap];1.00[EUR][1000 genomes]
rs73142031	1.00[EUR][1000 genomes]
rs73142049	1.00[EUR][1000 genomes]
rs73142089	1.00[EUR][1000 genomes]
rs73150636	1.00[EUR][1000 genomes]
rs73150668	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73150676	1.00[EUR][1000 genomes]
rs73776380	1.00[EUR][1000 genomes]
rs73776395	1.00[EUR][1000 genomes]
rs73776396	1.00[EUR][1000 genomes]
rs7727956	0.84[YRI][hapmap];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv432752	chr5:94524244-94691044	Flanking Bivalent TSS/Enh Enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:94682600-94684200	Enhancers	Fetal Brain Female	brain
2	chr5:94682800-94684400	Enhancers	Fetal Brain Male	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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