Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10072344	1.00[EUR][1000 genomes]
rs17084595	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17084604	0.85[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs17084611	0.88[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs55760868	0.85[AFR][1000 genomes]
rs56903600	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57134395	1.00[EUR][1000 genomes]
rs57371920	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59340203	1.00[EUR][1000 genomes]
rs60330559	0.88[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs6882948	0.96[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73135988	0.81[AFR][1000 genomes]
rs73142031	1.00[EUR][1000 genomes]
rs73142049	1.00[EUR][1000 genomes]
rs73142089	1.00[EUR][1000 genomes]
rs73150636	1.00[EUR][1000 genomes]
rs73150668	0.80[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73150676	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73776380	1.00[EUR][1000 genomes]
rs73776395	0.96[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73776396	0.88[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs7727956	0.96[AFR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv432752	chr5:94524244-94691044	Flanking Bivalent TSS/Enh Enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:94684400-94688400	Weak transcription	Fetal Brain Male	brain

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