Variant report

Variant	rs10081547
Chromosome Location	chr8:102723509-102723510
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs10808376	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs4734586	0.93[ASN][1000 genomes]
rs6468788	0.93[ASN][1000 genomes]
rs6468789	0.81[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs6468790	0.83[AMR][1000 genomes]
rs7003410	0.93[ASN][1000 genomes]
rs7814988	0.86[AMR][1000 genomes];0.93[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3401576	chr8:102640273-102724495	Weak transcription Genic enhancers Enhancers Strong transcription ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:102700000-102730600	Weak transcription	Aorta	Aorta
2	chr8:102708800-102729000	Weak transcription	Cortex derived primary cultured neurospheres	brain
3	chr8:102713800-102768400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr8:102714600-102740800	Weak transcription	Primary T cells from cord blood	blood
5	chr8:102716000-102733000	Weak transcription	Fetal Heart	heart
6	chr8:102716200-102734000	Weak transcription	Skeletal Muscle Male	skeletal muscle
7	chr8:102716400-102728800	Weak transcription	Fetal Stomach	stomach
8	chr8:102716600-102731200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
9	chr8:102716800-102730600	Weak transcription	Left Ventricle	heart
10	chr8:102721600-102724000	Weak transcription	Fetal Muscle Leg	muscle
11	chr8:102722000-102738200	Weak transcription	GM12878-XiMat	blood
12	chr8:102722600-102724400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr8:102722800-102728800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
14	chr8:102722800-102730600	Weak transcription	Primary T cells fromperipheralblood	blood
15	chr8:102722800-102730800	Weak transcription	Stomach Smooth Muscle	stomach
16	chr8:102722800-102734200	Weak transcription	Skeletal Muscle Female	skeletal muscle
17	chr8:102723000-102731400	Weak transcription	Lung	lung
18	chr8:102723000-102733800	Weak transcription	Gastric	stomach
19	chr8:102723200-102730000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
20	chr8:102723400-102728800	Weak transcription	Ovary	ovary
21	chr8:102723400-102729600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
22	chr8:102723400-102730200	Weak transcription	Fetal Muscle Trunk	muscle

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