Variant report

No data

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr8:96022490..96024943-chr8:96031523..96033508,2	MCF-7	breast:
2	chr8:95979420..95981585-chr8:96022909..96025497,2	MCF-7	breast:
3	chr8:96021495..96024798-chr8:96025934..96027928,3	K562	blood:
4	chr8:96021154..96024035-chr8:96026303..96030842,4	MCF-7	breast:
5	chr8:96022721..96025517-chr8:96026848..96029515,2	MCF-7	breast:
6	chr8:96017089..96018665-chr8:96022753..96024345,2	MCF-7	breast:
7	chr8:96007661..96009980-chr8:96021483..96023958,2	MCF-7	breast:
8	chr8:96014207..96016501-chr8:96023087..96024953,2	MCF-7	breast:

No data

rSNPs within LD-proxies of this variant (count:22)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1017301	chr8:95273503-96248352	Weak transcription Enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	87 gene(s)	inside rSNPs	diseases
2	nsv539680	chr8:95273503-96248352	Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	87 gene(s)	inside rSNPs	diseases
3	nsv508520	chr8:95939373-96140068	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
4	nsv524876	chr8:96000919-96027306	Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers	Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:95977400-96024200	Weak transcription	Aorta	Aorta
2	chr8:96003200-96032600	Weak transcription	Gastric	stomach
3	chr8:96009000-96036400	Weak transcription	Spleen	Spleen
4	chr8:96021600-96024800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr8:96021600-96027000	Enhancers	HepG2	liver
6	chr8:96021800-96024800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
7	chr8:96021800-96025400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
8	chr8:96022600-96024200	Enhancers	A549	lung
9	chr8:96022600-96024800	Enhancers	NHLF	lung
10	chr8:96022600-96025000	Weak transcription	Fetal Stomach	stomach
11	chr8:96023000-96024800	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
12	chr8:96023000-96025600	Enhancers	Osteobl	bone
13	chr8:96023200-96030200	Weak transcription	Primary monocytes fromperipheralblood	blood
14	chr8:96023400-96025200	Enhancers	Liver	Liver
15	chr8:96023400-96026000	Weak transcription	Left Ventricle	heart
16	chr8:96023400-96029000	Weak transcription	Primary neutrophils fromperipheralblood	blood
17	chr8:96023400-96032600	Weak transcription	Right Atrium	heart
18	chr8:96023400-96036600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
19	chr8:96023600-96025400	Enhancers	NHDF-Ad	bronchial
20	chr8:96023800-96025000	Enhancers	Muscle Satellite Cultured Cells	--

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