Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs11986042	1.00[CEU][hapmap];0.81[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs11989145	1.00[EUR][1000 genomes]
rs1457052	1.00[CEU][hapmap]
rs16912250	1.00[TSI][hapmap]
rs16912282	0.80[EUR][1000 genomes]
rs16912284	0.80[EUR][1000 genomes]
rs16912443	1.00[CEU][hapmap];1.00[TSI][hapmap]
rs16912684	1.00[CEU][hapmap]
rs16912685	1.00[CEU][hapmap]
rs16912691	1.00[CEU][hapmap];0.88[TSI][hapmap]
rs16912693	1.00[CEU][hapmap];1.00[TSI][hapmap]
rs16912695	1.00[CEU][hapmap]
rs16912719	1.00[CEU][hapmap]
rs16912765	1.00[CEU][hapmap];0.92[EUR][1000 genomes]
rs17364820	1.00[CEU][hapmap]
rs28557054	0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28692681	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4380890	1.00[CEU][hapmap]
rs55881674	0.92[EUR][1000 genomes]
rs55936372	0.96[EUR][1000 genomes]
rs6983587	1.00[CEU][hapmap]
rs6983905	1.00[CEU][hapmap]
rs6988912	1.00[CEU][hapmap]
rs7008245	1.00[CEU][hapmap]
rs7014248	1.00[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891190	chr8:92354921-92484872	Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	2 gene(s)	inside rSNPs	diseases
2	nsv523642	chr8:92391870-92542963	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	1 gene(s)	inside rSNPs	diseases
3	nsv1018648	chr8:92399692-92527826	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:92425000-92428200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr8:92425600-92426600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr8:92425800-92426600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr8:92425800-92426600	Enhancers	Fetal Lung	lung
5	chr8:92425800-92427200	Enhancers	Colon Smooth Muscle	Colon
6	chr8:92425800-92427200	Enhancers	Fetal Stomach	stomach
7	chr8:92426000-92426800	Enhancers	Brain Germinal Matrix	brain
8	chr8:92426000-92426800	Enhancers	Fetal Muscle Leg	muscle
9	chr8:92426200-92426600	Enhancers	NHDF-Ad	bronchial
10	chr8:92426400-92427200	Enhancers	Rectal Smooth Muscle	rectum

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