The 2.0 version of rSNPBase

Variant report

Variant rs10108168
Chromosome Location chr8:59055051-59055052
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:59015200-59058200 Weak transcription Aorta Aorta
2 chr8:59029000-59058000 Weak transcription Duodenum Smooth Muscle Duodenum
3 chr8:59041800-59058000 Weak transcription Colon Smooth Muscle Colon
4 chr8:59044000-59058000 Weak transcription HSMMtube muscle
5 chr8:59045000-59058000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr8:59045200-59058000 Weak transcription Brain Inferior Temporal Lobe brain
7 chr8:59046400-59058000 Weak transcription Fetal Brain Male brain
8 chr8:59046400-59058000 Weak transcription Gastric stomach
9 chr8:59049600-59058000 Weak transcription Fetal Kidney kidney
10 chr8:59049800-59057800 Weak transcription Brain Hippocampus Middle brain
11 chr8:59049800-59058000 Weak transcription Brain Substantia Nigra brain
12 chr8:59050600-59056200 Enhancers Cortex derived primary cultured neurospheres brain
13 chr8:59050600-59058000 Weak transcription Skeletal Muscle Female skeletal muscle
14 chr8:59051000-59056800 Enhancers GM12878-XiMat blood
15 chr8:59051000-59057800 Weak transcription Stomach Smooth Muscle stomach
16 chr8:59051000-59058000 Weak transcription Pancreas Pancrea
17 chr8:59052400-59055600 Strong transcription Fetal Stomach stomach
18 chr8:59052600-59055600 Enhancers NH-A brain
19 chr8:59052800-59055200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr8:59053200-59056200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr8:59053200-59058000 Weak transcription Esophagus oesophagus
22 chr8:59053200-59058200 Weak transcription Spleen Spleen
23 chr8:59053400-59055400 Weak transcription Right Atrium heart
24 chr8:59053400-59056200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr8:59053400-59056200 Enhancers Fetal Heart heart
26 chr8:59053400-59056200 Enhancers HepG2 liver
27 chr8:59053400-59058000 Weak transcription Skeletal Muscle Male skeletal muscle
28 chr8:59053600-59055600 Enhancers Fetal Adrenal Gland Adrenal Gland
29 chr8:59053600-59055800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
30 chr8:59053800-59055400 Weak transcription ES-WA7 Cell Line embryonic stem cell
31 chr8:59053800-59055400 Weak transcription Right Ventricle heart
32 chr8:59053800-59055600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr8:59053800-59055800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
34 chr8:59053800-59057200 Weak transcription HUES6 Cell Line embryonic stem cell
35 chr8:59053800-59057800 Weak transcription iPS-15b Cell Line embryonic stem cell
36 chr8:59053800-59058000 Weak transcription Placenta Amnion Placenta Amnion
37 chr8:59054000-59057400 Weak transcription iPS-20b Cell Line embryonic stem cell
38 chr8:59054000-59057800 Weak transcription Fetal Lung lung
39 chr8:59054200-59057000 Enhancers Left Ventricle heart
40 chr8:59054200-59058000 Enhancers Fetal Brain Female brain
41 chr8:59054400-59055600 Genic enhancers Fetal Muscle Leg muscle
42 chr8:59054400-59056800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr8:59054400-59056800 Enhancers Ovary ovary
44 chr8:59054400-59057400 Weak transcription ES-I3 Cell Line embryonic stem cell
45 chr8:59054400-59057400 Weak transcription HUES64 Cell Line embryonic stem cell
46 chr8:59054400-59058000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr8:59054600-59055400 Weak transcription Lung lung
48 chr8:59054600-59056800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr8:59054600-59057600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr8:59054600-59057800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015