The 2.0 version of rSNPBase

Variant report

Variant rs28615520
Chromosome Location chr8:59061801-59061802
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:59058800-59067400 Weak transcription Muscle Satellite Cultured Cells --
2 chr8:59058800-59068800 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr8:59059000-59062000 Enhancers Primary monocytes fromperipheralblood blood
4 chr8:59059000-59067400 Weak transcription Adipose Nuclei Adipose
5 chr8:59059200-59063400 Weak transcription Ovary ovary
6 chr8:59059200-59067600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr8:59059400-59063800 Weak transcription Gastric stomach
8 chr8:59059600-59064000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr8:59059600-59064800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr8:59059600-59067600 Weak transcription Placenta Placenta
11 chr8:59059600-59069600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
12 chr8:59059800-59062400 Enhancers Primary neutrophils fromperipheralblood blood
13 chr8:59059800-59063000 Weak transcription Spleen Spleen
14 chr8:59059800-59064200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr8:59060000-59072800 Weak transcription Fetal Brain Female brain
16 chr8:59060200-59063000 Weak transcription Fetal Stomach stomach
17 chr8:59060200-59064800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr8:59060200-59066200 Weak transcription Fetal Brain Male brain
19 chr8:59060200-59067000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr8:59060200-59067200 Weak transcription HSMMtube muscle
21 chr8:59060200-59067200 Weak transcription NHLF lung
22 chr8:59060200-59067600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr8:59060200-59067600 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr8:59060200-59067800 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr8:59060200-59068800 Weak transcription Fetal Kidney kidney
26 chr8:59060200-59071600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr8:59060200-59071800 Weak transcription Stomach Smooth Muscle stomach
28 chr8:59060600-59063400 Weak transcription Fetal Muscle Leg muscle
29 chr8:59060600-59067800 Weak transcription Brain Anterior Caudate brain
30 chr8:59060800-59062400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr8:59061000-59064800 Weak transcription Fetal Lung lung
32 chr8:59061000-59066800 Weak transcription HSMM muscle
33 chr8:59061200-59062800 Weak transcription Fetal Muscle Trunk muscle
34 chr8:59061200-59063000 Weak transcription Right Ventricle heart
35 chr8:59061400-59062800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr8:59061400-59068600 Weak transcription Cortex derived primary cultured neurospheres brain
37 chr8:59061400-59072800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
38 chr8:59061600-59062000 Enhancers Fetal Heart heart
39 chr8:59061600-59062000 Enhancers Monocytes-CD14+_RO01746 blood
40 chr8:59061800-59062000 Weak transcription Brain Hippocampus Middle brain
41 chr8:59061800-59062800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr8:59061800-59067800 Weak transcription Left Ventricle heart
43 chr8:59061800-59068000 Weak transcription Right Atrium heart

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Last update: Aug 31, 2015