Variant report

Variant	rs10108888
Chromosome Location	chr8:102731364-102731365
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs10107483	1.00[CEU][hapmap];0.89[EUR][1000 genomes]
rs1080598	0.91[EUR][1000 genomes]
rs16868178	0.87[CEU][hapmap]
rs2275994	0.87[CEU][hapmap]
rs28429768	0.95[EUR][1000 genomes]
rs28560062	0.87[EUR][1000 genomes]
rs28564461	0.90[EUR][1000 genomes]
rs4734582	0.87[CEU][hapmap]
rs72674296	0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7816488	1.00[CEU][hapmap];0.89[CHB][hapmap];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7816613	1.00[CEU][hapmap];0.89[CHB][hapmap];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7821322	1.00[CEU][hapmap]
rs7821561	1.00[CEU][hapmap]

Chromatin state (count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:102713800-102768400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr8:102714600-102740800	Weak transcription	Primary T cells from cord blood	blood
3	chr8:102716000-102733000	Weak transcription	Fetal Heart	heart
4	chr8:102716200-102734000	Weak transcription	Skeletal Muscle Male	skeletal muscle
5	chr8:102722000-102738200	Weak transcription	GM12878-XiMat	blood
6	chr8:102722800-102734200	Weak transcription	Skeletal Muscle Female	skeletal muscle
7	chr8:102723000-102731400	Weak transcription	Lung	lung
8	chr8:102723000-102733800	Weak transcription	Gastric	stomach
9	chr8:102727800-102733000	Weak transcription	Rectal Smooth Muscle	rectum
10	chr8:102728800-102731400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
11	chr8:102728800-102732800	Enhancers	Fetal Kidney	kidney
12	chr8:102729000-102731600	Genic enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr8:102729200-102733400	Weak transcription	Colon Smooth Muscle	Colon
14	chr8:102729200-102733800	Weak transcription	Duodenum Smooth Muscle	Duodenum
15	chr8:102729200-102734200	Weak transcription	Brain Cingulate Gyrus	brain
16	chr8:102729400-102731600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
17	chr8:102729400-102734200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
18	chr8:102729400-102734200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
19	chr8:102729600-102734200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
20	chr8:102730000-102733000	Weak transcription	Fetal Stomach	stomach
21	chr8:102730000-102733200	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
22	chr8:102730000-102733800	Weak transcription	Brain Substantia Nigra	brain
23	chr8:102730000-102734600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
24	chr8:102730000-102734800	Weak transcription	H9 Cell Line	embryonic stem cell
25	chr8:102730000-102735200	Weak transcription	Sigmoid Colon	Sigmoid Colon
26	chr8:102730000-102756000	Weak transcription	Psoas Muscle	Psoas
27	chr8:102730200-102731800	Strong transcription	Fetal Muscle Trunk	muscle
28	chr8:102730200-102733000	Weak transcription	Pancreas	Pancrea
29	chr8:102730200-102734200	Weak transcription	Brain Hippocampus Middle	brain
30	chr8:102730400-102731800	Genic enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
31	chr8:102730400-102733600	Weak transcription	Right Ventricle	heart
32	chr8:102730400-102734000	Weak transcription	Brain Anterior Caudate	brain
33	chr8:102730400-102734000	Weak transcription	Pancreatic Islets	Pancreatic Islet
34	chr8:102730400-102734800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
35	chr8:102730400-102735000	Weak transcription	Brain Inferior Temporal Lobe	brain
36	chr8:102730600-102731600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
37	chr8:102730600-102731600	Strong transcription	Aorta	Aorta
38	chr8:102730600-102731600	Genic enhancers	Fetal Muscle Leg	muscle
39	chr8:102730600-102731600	Strong transcription	Ovary	ovary
40	chr8:102730600-102731600	Enhancers	Placenta Amnion	Placenta Amnion
41	chr8:102730600-102731800	Strong transcription	Primary T cells fromperipheralblood	blood
42	chr8:102730600-102731800	Strong transcription	Left Ventricle	heart
43	chr8:102730600-102734400	Weak transcription	HUES6 Cell Line	embryonic stem cell
44	chr8:102730600-102743400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
45	chr8:102730800-102731600	Strong transcription	Stomach Smooth Muscle	stomach
46	chr8:102730800-102731800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
47	chr8:102730800-102731800	Strong transcription	Cortex derived primary cultured neurospheres	brain
48	chr8:102730800-102733400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
49	chr8:102730800-102734200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
50	chr8:102730800-102734600	Weak transcription	iPS-20b Cell Line	embryonic stem cell

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