Variant report

Variant	rs1011689
Chromosome Location	chr10:97760476-97760477
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10736097	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10748652	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs10786256	0.80[AFR][1000 genomes]
rs10882710	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2015029	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2039617	0.82[CHB][hapmap];0.94[JPT][hapmap];0.82[ASN][1000 genomes]
rs3748224	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs4145209	0.93[CEU][hapmap];0.82[EUR][1000 genomes]
rs6584044	0.92[CEU][hapmap];0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6584045	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6584046	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7093112	0.96[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[YRI][hapmap]
rs7096743	0.92[CEU][hapmap];0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7900838	0.96[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[YRI][hapmap];0.81[ASN][1000 genomes]
rs7911298	0.81[AFR][1000 genomes];0.87[EUR][1000 genomes]
rs7913835	0.93[CEU][hapmap];0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7919099	0.88[CEU][hapmap];0.82[EUR][1000 genomes]
rs7923326	0.90[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv948147	chr10:97755109-97761062	Enhancers Weak transcription	TF binding region CpG island lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:97755800-97765000	Weak transcription	Ovary	ovary

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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