Variant report

Variant rs10127448
Chromosome Location chr1:45187511-45187512
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:45174400-45190400 Weak transcription Lung lung
2 chr1:45181000-45187800 Weak transcription Placenta Placenta
3 chr1:45181200-45188800 Weak transcription Liver Liver
4 chr1:45181200-45194800 Weak transcription Brain Anterior Caudate brain
5 chr1:45183000-45187600 Enhancers Primary T helper cells PMA-I stimulated --
6 chr1:45183000-45188800 Enhancers Primary T helper naive cells fromperipheralblood blood
7 chr1:45183000-45188800 Enhancers Primary T killer naive cells fromperipheralblood blood
8 chr1:45183200-45189000 Enhancers Primary T helper naive cells from peripheral blood blood
9 chr1:45184000-45187800 Weak transcription Duodenum Mucosa Duodenum
10 chr1:45184000-45189000 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr1:45184000-45189200 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr1:45184000-45191000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr1:45184200-45188200 Weak transcription Colonic Mucosa Colon
14 chr1:45184200-45188800 Enhancers GM12878-XiMat blood
15 chr1:45184400-45187600 Enhancers K562 blood
16 chr1:45184600-45188800 Enhancers Primary T cells from cord blood blood
17 chr1:45184600-45189000 Enhancers Fetal Thymus thymus
18 chr1:45184800-45188800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
19 chr1:45184800-45188800 Enhancers Primary T helper 17 cells PMA-I stimulated --
20 chr1:45184800-45189000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
21 chr1:45185000-45187600 Enhancers Primary B cells from cord blood blood
22 chr1:45185200-45187600 Weak transcription Osteobl bone
23 chr1:45185200-45189200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
24 chr1:45185200-45190600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr1:45185200-45192400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr1:45185400-45187800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr1:45185600-45192200 Weak transcription NHDF-Ad bronchial
28 chr1:45185600-45194800 Weak transcription Dnd41 blood
29 chr1:45185800-45189000 Enhancers Primary B cells from peripheral blood blood
30 chr1:45186000-45188000 Enhancers HepG2 liver
31 chr1:45186000-45188800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr1:45186000-45189600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
33 chr1:45186000-45190200 Enhancers Primary Natural Killer cells fromperipheralblood blood
34 chr1:45186200-45187800 Weak transcription Spleen Spleen
35 chr1:45186200-45192400 Weak transcription HSMM muscle
36 chr1:45186800-45188800 Enhancers Primary hematopoietic stem cells blood
37 chr1:45187000-45187800 Weak transcription Muscle Satellite Cultured Cells --
38 chr1:45187000-45187800 Weak transcription Fetal Adrenal Gland Adrenal Gland
39 chr1:45187000-45188000 Active TSS A549 lung
40 chr1:45187000-45188800 Enhancers Primary neutrophils fromperipheralblood blood
41 chr1:45187200-45187600 Weak transcription Primary monocytes fromperipheralblood blood
42 chr1:45187200-45187600 Flanking Active TSS Primary T cells fromperipheralblood blood
43 chr1:45187200-45187600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
44 chr1:45187200-45187800 Bivalent/Poised TSS Aorta Aorta
45 chr1:45187200-45187800 Active TSS Rectal Mucosa Donor 29 rectum
46 chr1:45187200-45188000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
47 chr1:45187400-45187600 Flanking Active TSS Primary T helper cells fromperipheralblood blood
48 chr1:45187400-45187800 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
49 chr1:45187400-45187800 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
50 chr1:45187400-45187800 Active TSS Primary T killer memory cells from peripheral blood blood

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