Variant report

Variant rs11808189
Chromosome Location chr1:45230542-45230543
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:45205800-45240600 Weak transcription Ovary ovary
2 chr1:45206000-45240400 Weak transcription Right Atrium heart
3 chr1:45206200-45240400 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr1:45206200-45240600 Weak transcription Stomach Mucosa stomach
5 chr1:45206400-45232800 Weak transcription ES-WA7 Cell Line embryonic stem cell
6 chr1:45206400-45240600 Weak transcription Duodenum Smooth Muscle Duodenum
7 chr1:45206600-45240600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
8 chr1:45206800-45240200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr1:45207000-45233800 Strong transcription iPS-20b Cell Line embryonic stem cell
10 chr1:45207200-45234200 Strong transcription H1 Cell Line embryonic stem cell
11 chr1:45207200-45234400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr1:45207400-45233800 Strong transcription HUES64 Cell Line embryonic stem cell
13 chr1:45207600-45233800 Strong transcription HUES48 Cell Line embryonic stem cell
14 chr1:45207600-45234400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr1:45208600-45233400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr1:45208600-45234000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr1:45208800-45234400 Strong transcription HUES6 Cell Line embryonic stem cell
18 chr1:45209400-45235200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr1:45211200-45233800 Weak transcription Breast Myoepithelial Primary Cells Breast
20 chr1:45211400-45233600 Strong transcription H9 Cell Line embryonic stem cell
21 chr1:45211400-45234800 Strong transcription Primary hematopoietic stem cells short term culture blood
22 chr1:45211400-45235000 Strong transcription Fetal Stomach stomach
23 chr1:45211600-45231200 Strong transcription iPS-18 Cell Line embryonic stem cell
24 chr1:45211600-45234600 Strong transcription Fetal Muscle Trunk muscle
25 chr1:45211600-45235200 Strong transcription Thymus Thymus
26 chr1:45212000-45235000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr1:45212000-45235200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr1:45212400-45234800 Strong transcription Primary neutrophils fromperipheralblood blood
29 chr1:45212400-45235000 Strong transcription Fetal Thymus thymus
30 chr1:45214400-45240400 Weak transcription Stomach Smooth Muscle stomach
31 chr1:45215200-45231000 Strong transcription iPS DF 6.9 Cell Line embryonic stem cell
32 chr1:45215600-45233600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
33 chr1:45217800-45233400 Strong transcription Fetal Intestine Small intestine
34 chr1:45218000-45240600 Weak transcription Small Intestine intestine
35 chr1:45218200-45232600 Strong transcription iPS-15b Cell Line embryonic stem cell
36 chr1:45218200-45233600 Strong transcription Dnd41 blood
37 chr1:45218200-45233800 Strong transcription Cortex derived primary cultured neurospheres brain
38 chr1:45219000-45233800 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr1:45219200-45235200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr1:45219200-45240600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
41 chr1:45219200-45240800 Weak transcription Gastric stomach
42 chr1:45219600-45234600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr1:45223600-45234400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
44 chr1:45223600-45234800 Weak transcription Fetal Kidney kidney
45 chr1:45223800-45240600 Weak transcription Fetal Heart heart
46 chr1:45224000-45240400 Weak transcription Primary B cells from peripheral blood blood
47 chr1:45224200-45240400 Weak transcription Lung lung
48 chr1:45224800-45240400 Weak transcription HSMMtube muscle
49 chr1:45225400-45240000 Weak transcription Skeletal Muscle Female skeletal muscle
50 chr1:45226600-45240400 Weak transcription Rectal Mucosa Donor 29 rectum

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