The 2.0 version of rSNPBase

Variant report

Variant rs6671255
Chromosome Location chr1:45192949-45192950
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:45181200-45194800 Weak transcription Brain Anterior Caudate brain
2 chr1:45185600-45194800 Weak transcription Dnd41 blood
3 chr1:45187800-45196200 Weak transcription Right Atrium heart
4 chr1:45188000-45195800 Weak transcription H1 Cell Line embryonic stem cell
5 chr1:45189400-45196200 Weak transcription Brain Germinal Matrix brain
6 chr1:45189400-45196200 Weak transcription Colonic Mucosa Colon
7 chr1:45189600-45195000 Weak transcription Rectal Smooth Muscle rectum
8 chr1:45189800-45194800 Weak transcription Rectal Mucosa Donor 29 rectum
9 chr1:45189800-45195000 Weak transcription Liver Liver
10 chr1:45189800-45205000 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr1:45190000-45193600 Weak transcription Primary B cells from peripheral blood blood
12 chr1:45190000-45194800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
13 chr1:45190200-45196000 Weak transcription Primary T regulatory cells fromperipheralblood blood
14 chr1:45190400-45193400 Weak transcription Primary B cells from cord blood blood
15 chr1:45190600-45196200 Weak transcription Brain Hippocampus Middle brain
16 chr1:45190800-45194000 Weak transcription Primary T helper cells fromperipheralblood blood
17 chr1:45190800-45194800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
18 chr1:45190800-45194800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
19 chr1:45190800-45195000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
20 chr1:45191000-45193400 Weak transcription Primary T cells from cord blood blood
21 chr1:45191000-45194800 Weak transcription Primary T helper naive cells fromperipheralblood blood
22 chr1:45191000-45195800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
23 chr1:45191200-45194000 Weak transcription Fetal Thymus thymus
24 chr1:45191200-45194800 Weak transcription Primary neutrophils fromperipheralblood blood
25 chr1:45191200-45194800 Weak transcription Primary T helper naive cells from peripheral blood blood
26 chr1:45191200-45194800 Weak transcription Primary T helper cells PMA-I stimulated --
27 chr1:45191200-45194800 Weak transcription Thymus Thymus
28 chr1:45191200-45196200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
29 chr1:45191400-45193400 Weak transcription Primary hematopoietic stem cells blood
30 chr1:45191400-45194800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
31 chr1:45191400-45194800 Weak transcription Primary T cells fromperipheralblood blood
32 chr1:45191400-45194800 Weak transcription Primary T killer naive cells fromperipheralblood blood
33 chr1:45191400-45194800 Weak transcription Primary T killer memory cells from peripheral blood blood
34 chr1:45191400-45196600 Weak transcription iPS-15b Cell Line embryonic stem cell
35 chr1:45192000-45193200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr1:45192200-45193400 Enhancers Placenta Amnion Placenta Amnion
37 chr1:45192200-45196200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr1:45192400-45193000 Enhancers Primary hematopoietic stem cells short term culture blood
39 chr1:45192400-45193000 Enhancers Osteobl bone
40 chr1:45192400-45193200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
41 chr1:45192400-45193400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr1:45192400-45194000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
43 chr1:45192600-45193400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
44 chr1:45192600-45194800 Weak transcription K562 blood
45 chr1:45192600-45196000 Enhancers Monocytes-CD14+_RO01746 blood
46 chr1:45192600-45196200 Enhancers Primary monocytes fromperipheralblood blood
47 chr1:45192800-45194000 Enhancers Hela-S3 cervix
48 chr1:45192800-45194200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
49 chr1:45192800-45194800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr1:45192800-45194800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015