Variant report
| Variant | rs10136821 |
|---|---|
| Chromosome Location | chr14:55711592-55711593 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:5)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:5 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr14:55706022..55708410-chr14:55710949..55713300,2 | K562 | blood: | |
| 2 | chr14:55709704..55712679-chr14:55737747..55740445,2 | K562 | blood: | |
| 3 | chr14:55709259..55712260-chr14:55714004..55717778,3 | K562 | blood: | |
| 4 | chr14:55706701..55708410-chr14:55710949..55712624,2 | K562 | blood: | |
| 5 | chr14:55710760..55712909-chr14:55714004..55716438,2 | K562 | blood: |
| No data |
| No data |
| No data |
| Variant related genes | Relation type |
|---|---|
| ENSG00000271180 | Chromatin interaction |
| ENSG00000178974 | Chromatin interaction |
| ENSG00000258413 | Chromatin interaction |
rSNPs within LD-proxies of this variant (count:12)
| rs_ID | r2[population] |
|---|---|
| rs10139623 | 0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs11158032 | 1.00[AMR][1000 genomes] |
| rs28445131 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs28564748 | 0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs28667867 | 0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs7153537 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs7159339 | 1.00[EUR][1000 genomes] |
| rs73273690 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs73273692 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs73273693 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs8010658 | 0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs9919892 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
