Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10135471	0.84[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10142428	1.00[ASN][1000 genomes]
rs1033845	0.81[ASN][1000 genomes]
rs11158391	1.00[ASN][1000 genomes]
rs1475457	0.84[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1475458	0.84[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1475459	0.82[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1951733	0.84[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1951734	0.84[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1951735	0.84[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1957683	0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4491431	0.84[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4981488	0.84[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4982821	0.88[ASN][1000 genomes]
rs6573420	0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6573427	0.89[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6573428	0.89[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7149864	0.97[ASN][1000 genomes]
rs7154065	0.84[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs8014495	0.84[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs8014557	0.84[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs8020506	0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1043299	chr14:23766696-24351724	Active TSS Enhancers Flanking Active TSS Weak transcription Genic enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	104 gene(s)	inside rSNPs	diseases
2	esv3405661	chr14:24189883-24670942	Strong transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Weak transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	131 gene(s)	inside rSNPs	diseases
3	nsv564045	chr14:24224245-24348343	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
4	nsv901494	chr14:24243637-24386159	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:24344600-24353000	Weak transcription	Ovary	ovary
2	chr14:24345200-24347000	Enhancers	HSMMtube	muscle
3	chr14:24346400-24347200	Flanking Active TSS	GM12878-XiMat	blood

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