Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10132994	0.85[YRI][hapmap];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10134227	0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10142265	0.85[ASN][1000 genomes]
rs10142341	0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10142445	0.88[YRI][hapmap];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10143651	0.89[YRI][hapmap];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10145991	0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10146138	0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11621143	0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11622684	0.90[EUR][1000 genomes]
rs11624927	1.00[CHB][hapmap]
rs11848897	0.89[ASN][1000 genomes]
rs17100612	1.00[CEU][hapmap]
rs17100615	1.00[CEU][hapmap]
rs17100617	1.00[CEU][hapmap]
rs17100629	0.85[YRI][hapmap];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17100740	1.00[JPT][hapmap]
rs1998203	1.00[CEU][hapmap];0.80[YRI][hapmap]
rs28416602	0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs28758782	0.82[EUR][1000 genomes]
rs41422646	0.85[YRI][hapmap]
rs56913206	0.91[AFR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs59763288	0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7156115	0.95[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv527251	chr14:63400786-64068806	Flanking Bivalent TSS/Enh Weak transcription Strong transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
2	nsv520528	chr14:63400786-64157117	Weak transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	49 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:63496800-63497400	Enhancers	iPS-18 Cell Line	embryonic stem cell
2	chr14:63497200-63497400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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