Variant report

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10137336	0.88[AFR][1000 genomes];0.81[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs10146014	0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10149704	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10150517	0.88[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12586637	0.93[ASN][1000 genomes]
rs12588002	0.89[ASN][1000 genomes]
rs1511318	0.91[ASN][1000 genomes]
rs1698258	0.89[ASN][1000 genomes]
rs1705662	0.87[ASN][1000 genomes]
rs17119147	0.87[AFR][1000 genomes];0.81[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs17119189	0.96[ASN][1000 genomes]
rs17637116	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs17643817	0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17710375	0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs17711443	0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17711598	0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs28693875	0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs55959064	0.96[ASN][1000 genomes]
rs57002888	0.89[ASN][1000 genomes]
rs59712100	0.87[ASN][1000 genomes]
rs7156850	0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs72697171	0.89[ASN][1000 genomes]
rs72697173	0.89[ASN][1000 genomes]
rs72697185	0.93[ASN][1000 genomes]
rs8003162	0.91[ASN][1000 genomes]
rs8003919	0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9323741	0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv431019	chr14:84303525-84365447	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv902159	chr14:84336944-84447356	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:84334600-84339400	Weak transcription	Ovary	ovary
2	chr14:84337000-84342400	Enhancers	Fetal Stomach	stomach
3	chr14:84337800-84339800	Weak transcription	Fetal Lung	lung
4	chr14:84338400-84339800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr14:84338400-84340600	Weak transcription	HSMMtube	muscle

Quick Search: