Variant report

Variant	rs10149743
Chromosome Location	chr14:79222709-79222710
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10129219	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs10137393	0.81[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10144083	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs6574470	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7145730	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7149051	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7150361	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs929920	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs929921	0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:79219200-79223400	Weak transcription	Brain Hippocampus Middle	brain
2	chr14:79219400-79224400	Weak transcription	Brain Cingulate Gyrus	brain
3	chr14:79219400-79224400	Weak transcription	Brain Inferior Temporal Lobe	brain
4	chr14:79219600-79223000	Weak transcription	Brain Substantia Nigra	brain
5	chr14:79219600-79224200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr14:79219600-79224800	Weak transcription	Brain Angular Gyrus	brain
7	chr14:79222400-79224600	Weak transcription	GM12878-XiMat	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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